RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 RPL10LQ96L21 214 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ANKRD27Q96NW4 1050 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 LRRC37BQ96QE4 947 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 IWS1Q96ST2 819 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ELAC2Q9BQ52 826 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TIPINQ9BVW5 301 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TLR10Q9BXR5 811 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PITHD1Q9GZP4 211 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HAUS4Q9H6D7 363 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 RNPEPL1Q9HAU8 725 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 EPB41L5Q9HCM4 733 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 DMAP1Q9NPF5 467 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TRPV5Q9NQA5 729 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 STK32BQ9NY57 414 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TAB2Q9NYJ8 693 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HMG20BQ9P0W2 317 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 LIMA1Q9UHB6 759 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 INTUQ9ULD6 942 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PA2G4Q9UQ80 394 aaKnown RBP3.4□□□□□ -1.87
CSDE1-216ENST00000534389 GIT1Q9Y2X7 761 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 TIMM22Q9Y584 194 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 HEY1Q9Y5J3 304 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 GMEB1Q9Y692 573 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 EID1Q9Y6B2 187 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 SLC4A7Q9Y6M7 1214 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 PCDH11XQ9BZA7 1347 aa3.4□□□□□ -1.87
CSDE1-216ENST00000534389 ABCC12Q96J65 1359 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 NCAPD2Q15021 1401 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 N4BP2Q86UW6 1770 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 A0A1W2PRX2 142 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 TTC26A0AVF1 554 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ANO9A1A5B4 782 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 TRIM43BA6NCK2 446 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 BOLA2-SMG1P6H3BVE0 249 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 K7ESF4 209 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 EIF3FO00303 357 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 NRP1O14786 923 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 MAGEB3O15480 346 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 HNRNPRO43390 633 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PHF2O75151 1096 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 NDUFS2O75306 463 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 E2F6O75461 281 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ALDH1A2O94788 518 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 MOCS3O95396 460 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ITGA2BP08514 1039 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 LTA4HP09960 611 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 UBTFL1P0CB47 393 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PF4V1P10720 104 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 RBP3P10745 1247 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ACADSP16219 412 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PRLRP16471 622 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 DESP17661 470 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 AGXTP21549 392 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CALB2P22676 271 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ADSLP30566 484 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CXCR5P32302 372 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 KIF5BP33176 963 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CA8P35219 290 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 HOXD12P35452 270 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CCT6AP40227 531 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 MSH2P43246 934 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 TOB1P50616 345 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CACNA2D1P54289 1103 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 RAD23BP54727 409 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 NPEPPSP55786 919 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ANTXR2P58335 489 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 MAGOHP61326 146 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 HPCAP84074 193 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ATP2C1P98194 919 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CD69Q07108 199 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 KLC1Q07866 573 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 MALLQ13021 153 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 RRS1Q15050 365 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 POSTNQ15063 836 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 MEA1Q16626 185 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 KIAA0753Q2KHM9 967 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PRR31Q5SQ13 230 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 GJC2Q5T442 439 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 UBAP2Q5T6F2 1119 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 GKAP1Q5VSY0 366 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 TBC1D9BQ66K14 1250 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 KLHL10Q6JEL2 608 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 GLB1LQ6UWU2 654 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 BTNL9Q6UXG8 535 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 GAREM2Q75VX8 874 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PDZD4Q76G19 769 aaPredicted RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 RSPH3Q86UC2 560 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 AACSQ86V21 672 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 RAB11FIP4Q86YS3 637 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CNGA4Q8IV77 575 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 RHOT1Q8IXI2 618 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 LMNTD2Q8IXW0 634 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 CAMKK1Q8N5S9 505 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ENDOVQ8N8Q3 282 aaKnown RBP3.39□□□□□ -1.87
CSDE1-216ENST00000534389 ANKRD53Q8N9V6 530 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 SYT8Q8NBV8 401 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 PLA2G15Q8NCC3 412 aa3.39□□□□□ -1.87
CSDE1-216ENST00000534389 GLB1L3Q8NCI6 653 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms