RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 MT-CO3P00414 261 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 TUBB4AP04350 444 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 MYL3P08590 195 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 CYP2A6P11509 494 aaPredicted RBP4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 MYL4P12829 197 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 MPGP29372 298 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 EIF4A1P60842 406 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 DEUP1Q05D60 604 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 FHL3Q13643 280 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 SRSF7Q16629 238 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 CERKLQ49MI3 558 aaPredicted RBP4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 CEP78Q5JTW2 689 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 CRTC1Q6UUV9 634 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 C5orf34Q96MH7 638 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 MAGEB5Q9BZ81 275 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 ASAP1Q9ULH1 1129 aa4.7□□□□□ -1.66
ATPAF1-211ENST00000534216 COL3A1P02461 1466 aaPredicted RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 PPP6CO00743 305 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 GCATO75600 419 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 KRT18P05783 430 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 PRR35P0CG20 571 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 ARP10275 920 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 CDK4P11802 303 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 ADRA1DP25100 572 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 EPHB2P29323 1055 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 TM4SF4P48230 202 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 TBX4P57082 545 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 MTAPQ13126 283 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 EZH2Q15910 746 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 C4orf46Q504U0 113 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 TMEM63BQ5T3F8 832 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 HIBCHQ6NVY1 386 aaPredicted RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 USP17L6PQ6QN14 398 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 DPP9Q86TI2 863 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 FSTL5Q8N475 847 aaPredicted RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 PNPLA1Q8N8W4 532 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 NGDNQ8NEJ9 315 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 SUN3Q8TAQ9 357 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 VPS50Q96JG6 964 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 CCDC17Q96LX7 622 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 SH2D3AQ9BRG2 576 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 QTRT1Q9BXR0 403 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 ARNT2Q9HBZ2 717 aa4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 GAR1Q9NY12 217 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-211ENST00000534216 SETD1BQ9UPS6 1966 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 RASA4BC9J798 803 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 H3BNC9 293 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 RASA4O43374 803 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 MYL1P05976 194 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 NBPF7P0C2Y1 421 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 TMEM225BP0DP42 221 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 TNFSF4P23510 183 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 YY1P25490 414 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 SSBP2P81877 361 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 CFHR3Q02985 330 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 PMS2P11Q13670 270 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 LARS2Q15031 903 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 ACOX1Q15067 660 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 LONRF1Q17RB8 773 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 FAXCQ5TGI0 409 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 TMEM65Q6PI78 240 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 KIAA0408Q6ZU52 694 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 YTHDF3Q7Z739 585 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 NEK8Q86SG6 692 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 GALNT16Q8N428 558 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 C12orf76Q8N812 135 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 CCDC150Q8NCX0 1101 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 MAFAQ8NHW3 353 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 BRI3BPQ8WY22 251 aa4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 EDC3Q96F86 508 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-211ENST00000534216 TMEM232C9JQI7 657 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 CA12O43570 354 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 NCK2O43639 380 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 COQ9O75208 318 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 WDR47O94967 919 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 ATF7P17544 494 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 KELP23276 732 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 MST1P26927 711 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 GABRB3P28472 473 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 GPC5P78333 572 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 GPS1Q13098 491 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 ARL13BQ3SXY8 428 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 SUPT20HL1Q3ZLR7 823 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 MTX3Q5HYI7 312 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 FAM209BQ5JX69 171 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 ZNF626Q68DY1 528 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 GRHL2Q6ISB3 625 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 SLC18B1Q6NT16 456 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 MRNIPQ6NTE8 343 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 DCDC5Q6ZRR9 648 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 CCDC28AQ8IWP9 274 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 ZNF398Q8TD17 642 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 PARD3BQ8TEW8 1205 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 PNISRQ8TF01 805 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 ABHD5Q8WTS1 349 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 KAZALD1Q96I82 304 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 RIPOR3Q96MK2 946 aa4.67□□□□□ -1.66
ATPAF1-211ENST00000534216 WDR24Q96S15 920 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms