RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ATOH1Q92858 354 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-227ENST00000533909 LINC00597Q9H2U6 94 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 LMAN1LQ9HAT1 526 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 SIX2Q9NPC8 291 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 CNGB3Q9NQW8 809 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 NUDT5Q9UKK9 219 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 CEP83Q9Y592 693 aa14.05□□□□□ -0.16
CAPN1-227ENST00000533909 HELZP42694 1942 aaKnown RBP14.04□□□□□ -0.16
CAPN1-227ENST00000533909 MIA3Q5JRA6 1907 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 LAMTOR5O43504 91 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 FBXO21O94952 628 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 RPS9P46781 194 aaKnown RBP14.04□□□□□ -0.16
CAPN1-227ENST00000533909 ZNF165P49910 485 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 UBXN1Q04323 297 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 PKDCCQ504Y2 493 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 DGKKQ5KSL6 1271 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 KLHDC7AQ5VTJ3 777 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 SMYD5Q6GMV2 418 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 PM20D1Q6GTS8 502 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 PMF1Q6P1K2 205 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 DENND1BQ6P3S1 775 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 KLHDC10Q6PID8 442 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 SCD5Q86SK9 330 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 PRSS33Q8NF86 280 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 SLC35F5Q8WV83 523 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 ZNF606Q8WXB4 792 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 OTUB2Q96DC9 234 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 FAM122AQ96E09 287 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 HSFY1Q96LI6 401 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 NOX5Q96PH1 765 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 P2RY13Q9BPV8 354 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 BPIFA3Q9BQP9 254 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 FAM207AQ9NSI2 230 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-227ENST00000533909 OLA1Q9NTK5 396 aaKnown RBP14.04□□□□□ -0.16
CAPN1-227ENST00000533909 OSER1Q9NX31 292 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 MARCH2Q9P0N8 246 aa14.04□□□□□ -0.16
CAPN1-227ENST00000533909 LIMA1Q9UHB6 759 aaKnown RBP14.04□□□□□ -0.16
CAPN1-227ENST00000533909 H0Y858 1186 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 FOXN3O00409 490 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-227ENST00000533909 MDM4O15151 490 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 SART1O43290 800 aaKnown RBP14.03□□□□□ -0.16
CAPN1-227ENST00000533909 UCHL3P15374 230 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 GJA4P35212 333 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 ACADSBP45954 432 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 SNX16P57768 344 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 COG7P83436 770 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 ZXDBP98169 803 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 PPP2R5DQ14738 602 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-227ENST00000533909 ANGPT1Q15389 498 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 MEA1Q16626 185 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 C1orf210Q8IVY1 113 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 NEK11Q8NG66 645 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 IRGQQ8WZA9 623 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 NDRG1Q92597 394 aaKnown RBP14.03□□□□□ -0.16
CAPN1-227ENST00000533909 CLDN23Q96B33 292 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 ZFRQ96KR1 1074 aaKnown RBP14.03□□□□□ -0.16
CAPN1-227ENST00000533909 SPAG5Q96R06 1193 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 KLF16Q9BXK1 252 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-227ENST00000533909 MIS12Q9H081 205 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 SYNCQ9H7C4 482 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 ACP6Q9NPH0 428 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 PLCB1Q9NQ66 1216 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 FHOD1Q9Y613 1164 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 COL4A3Q01955 1670 aa14.03□□□□□ -0.16
CAPN1-227ENST00000533909 SLC12A8A0AV02 714 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 OTOL1A6NHN0 477 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-227ENST00000533909 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 LGALS16A8MUM7 142 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 E7ENQ6 273 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 CYP17A1P05093 508 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 HMBSP08397 361 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 ADH5P11766 374 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 DAOAP59103 153 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 KCNMA1Q12791 1236 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 SYCP1Q15431 976 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 ANO4Q32M45 955 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 BSPRYQ5W0U4 402 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 PASD1Q8IV76 773 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 ZNF276Q8N554 614 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 EDEM1Q92611 657 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 CD101Q93033 1021 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 IER2Q9BTL4 223 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 TRIM62Q9BVG3 475 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 STK33Q9BYT3 514 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 DCLK3Q9C098 648 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 DLGAP2Q9P1A6 1054 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 AJAP1Q9UKB5 411 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-227ENST00000533909 ZNF510Q9Y2H8 683 aa14.02□□□□□ -0.17
CAPN1-227ENST00000533909 COL4A2P08572 1712 aa14.01□□□□□ -0.17
CAPN1-227ENST00000533909 GOLGA6L19H0YKK7 550 aa14.01□□□□□ -0.17
CAPN1-227ENST00000533909 TRDMT1O14717 391 aaKnown RBP14.01□□□□□ -0.17
CAPN1-227ENST00000533909 CAPN9O14815 690 aa14.01□□□□□ -0.17
CAPN1-227ENST00000533909 PNMA6AP0CW24 399 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-227ENST00000533909 ZNF18P17022 549 aa14.01□□□□□ -0.17
CAPN1-227ENST00000533909 DRD1P21728 446 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms