RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 EFHC1Q5JVL4 640 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 DNAJC24Q6P3W2 148 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 MCOLN2Q8IZK6 566 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 ZSCAN18Q8TBC5 510 aaPredicted RBP18.29■□□□□ 0.52
NXF1-216ENST00000533499 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 PHF7Q9BWX1 381 aaPredicted RBP18.29■□□□□ 0.52
NXF1-216ENST00000533499 METTL5Q9NRN9 209 aaKnown RBP18.29■□□□□ 0.52
NXF1-216ENST00000533499 SMPD4Q9NXE4 827 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 RASAL2Q9UJF2 1139 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 DENND4CQ5VZ89 1909 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 ANAPC1Q9H1A4 1944 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 DPYSL4O14531 572 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
NXF1-216ENST00000533499 GJB6O95452 261 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 TBX18O95935 607 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 ZDHHC11BP0C7U3 371 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 NCAM1P13591 858 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 RRM1P23921 792 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 DDX6P26196 483 aaKnown RBP eCLIP18.28■□□□□ 0.52
NXF1-216ENST00000533499 GABRB2P47870 512 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 YWHAZP63104 245 aaKnown RBP18.28■□□□□ 0.52
NXF1-216ENST00000533499 ZNF268Q14587 947 aaPredicted RBP18.28■□□□□ 0.52
NXF1-216ENST00000533499 SPA17Q15506 151 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 OLFML1Q6UWY5 402 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 MON1BQ7L1V2 547 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 TADA2BQ86TJ2 420 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 MIB1Q86YT6 1006 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 ZDHHC17Q8IUH5 632 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 SLC22A12Q96S37 553 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 ABCC13Q9NSE7 274 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.28■□□□□ 0.52
NXF1-216ENST00000533499 WDR35Q9P2L0 1181 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 CNOT8Q9UFF9 292 aaKnown RBP18.28■□□□□ 0.52
NXF1-216ENST00000533499 NAALADL1Q9UQQ1 740 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 NR2E1Q9Y466 385 aa18.28■□□□□ 0.52
NXF1-216ENST00000533499 NCANO14594 1321 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 DENND4AQ7Z401 1863 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 SYNJ2BP-COX16A0A087WUM0 186 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 C2CD4DB7Z1M9 353 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 COCHO43405 550 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 NRDCO43847 1150 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 HSF2BPO75031 334 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 HMBSP08397 361 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 IRF1P10914 325 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 ATP5C1P36542 298 aaKnown RBP18.27■□□□□ 0.52
NXF1-216ENST00000533499 PTP4A2Q12974 167 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 MTF1Q14872 753 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 DCAF6Q58WW2 860 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 BHLHA9Q7RTU4 235 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 ARID3BQ8IVW6 561 aaPredicted RBP18.27■□□□□ 0.52
NXF1-216ENST00000533499 CMTM8Q8IZV2 173 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 DEFB106AQ8N104 65 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 SCML4Q8N228 414 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 ATXN2LQ8WWM7 1075 aaKnown RBP18.27■□□□□ 0.52
NXF1-216ENST00000533499 TRIM11Q96F44 468 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 TRIM62Q9BVG3 475 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 POPDC2Q9HBU9 364 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 CLIC5Q9NZA1 410 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 GDE1Q9NZC3 331 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 COX16Q9P0S2 106 aa18.27■□□□□ 0.52
NXF1-216ENST00000533499 TCF20Q9UGU0 1960 aaKnown RBP18.27■□□□□ 0.52
NXF1-216ENST00000533499 ANKRD62A6NC57 917 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 H2AFZP0C0S5 128 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 KRT3P12035 628 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 LAMP2P13473 410 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 GALCP54803 685 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 ASTE1Q2TB18 679 aaPredicted RBP18.26■□□□□ 0.51
NXF1-216ENST00000533499 FAM78AQ5JUQ0 283 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 H2AFVQ71UI9 128 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 CCDC170Q8IYT3 715 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 EMC1Q8N766 993 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 ADAM32Q8TC27 787 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 SMARCD2Q92925 531 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 CDK5RAP1Q96SZ6 601 aaKnown RBP18.26■□□□□ 0.51
NXF1-216ENST00000533499 KXD1Q9BQD3 176 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 RNF38Q9H0F5 515 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 ISCUQ9H1K1 167 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 FAM204AQ9H8W3 233 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 SFMBT1Q9UHJ3 866 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 CPQQ9Y646 472 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 EPN1Q9Y6I3 576 aaPredicted RBP18.26■□□□□ 0.51
NXF1-216ENST00000533499 DOCK8Q8NF50 2099 aa18.26■□□□□ 0.51
NXF1-216ENST00000533499 SLC12A8A0AV02 714 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 OAS1P00973 400 aaKnown RBP18.25■□□□□ 0.51
NXF1-216ENST00000533499 VIPR2P41587 438 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 MAGEA1P43355 309 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 SNX30Q5VWJ9 437 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 SYPL2Q5VXT5 272 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 POTEHQ6S545 545 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 RAD9BQ6WBX8 426 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 SLC26A9Q7LBE3 791 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 C3orf20Q8ND61 904 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 CTNNBL1Q8WYA6 563 aaPredicted RBP18.25■□□□□ 0.51
NXF1-216ENST00000533499 VCPIP1Q96JH7 1222 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 ASB2Q96Q27 587 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 PACSIN1Q9BY11 444 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 THAP2Q9H0W7 228 aa18.25■□□□□ 0.51
NXF1-216ENST00000533499 OLA1Q9NTK5 396 aaKnown RBP18.25■□□□□ 0.51
NXF1-216ENST00000533499 ASNSD1Q9NWL6 643 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms