RNA–Protein interactions for RNA: ENST00000533259.1

PDE4DIP-231, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-231	ENST00000533259	TTLL2	Q9BWV7	592 aa		11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	RNF38	Q9H0F5	515 aa		11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	RTN4	Q9NQC3	1192 aa	Known RBP	11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	TMEM30A	Q9NV96	361 aa		11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	PCDHGA5	Q9Y5G8	931 aa		11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	HELZ	P42694	1942 aa	Known RBP	11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	THADA	Q6YHU6	1953 aa		11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259	ZZEF1	O43149	2961 aa		11.34	□□□□□ -0.59
PDE4DIP-231	ENST00000533259		A0A1B0GTH6	734 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ZNF840P	A6NDX5	716 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	LEFTY2	O00292	366 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	CBFA2T2	O43439	604 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	FAM163B	P0C2L3	166 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	CHRM1	P11229	460 aa	Predicted RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SLC9A1	P19634	815 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ATIC	P31939	592 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	GNL1	P36915	607 aa	Predicted RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TNNC1	P63316	161 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ZNF667	Q5HYK9	610 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SPOPL	Q6IQ16	392 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	C4orf50	Q6ZRC1	276 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	DENND5B	Q6ZUT9	1274 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ADGRG2	Q8IZP9	1017 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TTC16	Q8NEE8	873 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MYCBPAP	Q8TBZ2	947 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	USP33	Q8TEY7	942 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	DDX1	Q92499	740 aa	Known RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TATDN2	Q93075	761 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PCED1B	Q96HM7	432 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	NT5C1B	Q96P26	610 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MMS19	Q96T76	1030 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MRPL45	Q9BRJ2	306 aa	Known RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	XPO4	Q9C0E2	1151 aa	Known RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	INTS2	Q9H0H0	1204 aa	Known RBP	11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	COQ4	Q9Y3A0	265 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MYH10	P35580	1976 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PCNX2	A6NKB5	2137 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PI4KA	P42356	2102 aa		11.33	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	GTPBP10	A4D1E9	387 aa	Known RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PMM2	O15305	246 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TACC1	O75410	805 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	APBB3	O95704	486 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	P4HA1	P13674	534 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PFKL	P17858	780 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PON1	P27169	355 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	GRIK1	P39086	918 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MPL	P40238	635 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	CACNA2D1	P54289	1103 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	NOP14	P78316	857 aa	Known RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SLC7A9	P82251	487 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MESP2	Q0VG99	397 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	KCNMA1	Q12791	1236 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	NR1H3	Q13133	447 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SYCP1	Q15431	976 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MAPRE1	Q15691	268 aa	Known RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	IL31	Q6EBC2	164 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TCEAL6	Q6IPX3	200 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SFTPA1	Q8IWL2	248 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PPM1K	Q8N3J5	372 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	KIAA1958	Q8N8K9	716 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	C12orf50	Q8NA57	414 aa	Predicted RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TAF4B	Q92750	862 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TCEAL3	Q969E4	200 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	EXOC4	Q96A65	974 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	C8orf48	Q96LL4	319 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	LSM14B	Q9BX40	385 aa	Known RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TRPM5	Q9NZQ8	1165 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	INVS	Q9Y283	1065 aa		11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ASCC3	Q8N3C0	2202 aa	Known RBP	11.32	□□□□□ -0.6
PDE4DIP-231	ENST00000533259		A0A0A0MRY4	1105 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	BCLAF3	A2AJT9	711 aa	Known RBP	11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259		F8VP50	259 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	NFATC1	O95644	943 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	OLFM2	O95897	454 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ASS1	P00966	412 aa	Known RBP	11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	OAS1	P00973	400 aa	Known RBP	11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PTPN1	P18031	435 aa	Known RBP	11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	PML	P29590	882 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SLC6A11	P48066	632 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	KLK7	P49862	253 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	CYP27A1	Q02318	531 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	APBA1	Q02410	837 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	GSE1	Q14687	1217 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	C2orf27A	Q580R0	203 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	MDH1B	Q5I0G3	518 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	TRIM65	Q6PJ69	517 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	SCARA5	Q6ZMJ2	495 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	RRAGA	Q7L523	313 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	RASSF3	Q86WH2	238 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	NEK11	Q8NG66	645 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	ACD	Q96AP0	544 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	B3GNT5	Q9BYG0	378 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	XYLT2	Q9H1B5	865 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	DPEP3	Q9H4B8	488 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	GRPEL1	Q9HAV7	217 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	VPS45	Q9NRW7	570 aa		11.31	□□□□□ -0.6
PDE4DIP-231	ENST00000533259	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms