RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 DEC1Q9P2X7 70 aa18.81■□□□□ 0.6
PCF11-206ENST00000533018 A0A1W2PQ27 194 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 A0A1W2PQ64 194 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 A0A1W2PQD8 194 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 CYP26A1O43174 497 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 MAP3K13O43283 966 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 CAVIN2O95810 425 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 ADRB1P08588 477 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 TNFRSF4P43489 277 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 ZNF394Q53GI3 561 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 CLEC20AQ6ZU45 233 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 GPRIN1Q7Z2K8 1008 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 RASSF3Q86WH2 238 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 WBP2Q969T9 261 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 CNTNAP3BQ96NU0 1288 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 CNTNAP3Q9BZ76 1288 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 TMEM8AQ9HCN3 771 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 LSM7Q9UK45 103 aaKnown RBP18.8■□□□□ 0.6
PCF11-206ENST00000533018 SCML2Q9UQR0 700 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 ACACBO00763 2458 aa18.8■□□□□ 0.6
PCF11-206ENST00000533018 A0A0A0MRY4 1105 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 BCLAF3A2AJT9 711 aaKnown RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 NEDD8-MDP1E9PL57 170 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 TULP3O75386 442 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 KIR2DL1P43626 348 aaPredicted RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 DHPSP49366 369 aaPredicted RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 LIMK1P53667 647 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 HSF5Q4G112 596 aaPredicted RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 C10orf76Q5T2E6 689 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 RNF43Q68DV7 783 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 KRT39Q6A163 491 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 TPGS1Q6ZTW0 290 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 SMYD4Q8IYR2 804 aaPredicted RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 HMGB4Q8WW32 186 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 RLN3Q8WXF3 142 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 HEXIM2Q96MH2 286 aaKnown RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 KLF16Q9BXK1 252 aaPredicted RBP18.79■□□□□ 0.6
PCF11-206ENST00000533018 NUDT5Q9UKK9 219 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 PCDHA5Q9Y5H7 936 aa18.79■□□□□ 0.6
PCF11-206ENST00000533018 GON4LQ3T8J9 2241 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 A0A1W2PQH9 124 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 TCRBV21S2A2A0A5A6 115 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 HOXC11O43248 304 aaPredicted RBP18.78■□□□□ 0.6
PCF11-206ENST00000533018 CILPO75339 1184 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 RARGP13631 454 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 HNRNPLP14866 589 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCF11-206ENST00000533018 BCKDHBP21953 392 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 C10orf120Q5SQS8 335 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 PMS2CLQ68D20 193 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 HTR3DQ70Z44 454 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 CYP2U1Q7Z449 544 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 ETFBKMTQ8IXQ9 262 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 ZNF513Q8N8E2 541 aaPredicted RBP18.78■□□□□ 0.6
PCF11-206ENST00000533018 WHAMMQ8TF30 809 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 SPACA7Q96KW9 195 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 XPO6Q96QU8 1125 aaKnown RBP18.78■□□□□ 0.6
PCF11-206ENST00000533018 BBS2Q9BXC9 721 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
PCF11-206ENST00000533018 OSER1Q9NX31 292 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 NAGPAQ9UK23 515 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 CHD8Q9HCK8 2581 aa18.78■□□□□ 0.6
PCF11-206ENST00000533018 GOLGA6L4A6NEF3 574 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 HHLA1C9JL84 531 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 MDM4O15151 490 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 CETN3O15182 167 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 STX10O60499 249 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 EPB41P11171 864 aaKnown RBP18.77■□□□□ 0.6
PCF11-206ENST00000533018 GTF2H1P32780 548 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 PNOCQ13519 176 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 PPP1R26Q5T8A7 1209 aaPredicted RBP18.77■□□□□ 0.6
PCF11-206ENST00000533018 TRMT11Q7Z4G4 463 aaKnown RBP18.77■□□□□ 0.6
PCF11-206ENST00000533018 PHTF2Q8N3S3 785 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 EDEM2Q9BV94 578 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 NMUR1Q9HB89 426 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 PNPLA8Q9NP80 782 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 CYLDQ9NQC7 956 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 DNMT3LQ9UJW3 386 aa18.77■□□□□ 0.6
PCF11-206ENST00000533018 EPG5Q9HCE0 2579 aa18.77■□□□□ 0.59
PCF11-206ENST00000533018 KHNYNO15037 678 aaKnown RBP18.76■□□□□ 0.59
PCF11-206ENST00000533018 TRIM24O15164 1050 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 ADAM23O75077 832 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 TYRP14679 529 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 WASP42768 502 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 MXI1P50539 228 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 ENPEPQ07075 957 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 EDRF1Q3B7T1 1238 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 DCAF17Q5H9S7 520 aaPredicted RBP18.76■□□□□ 0.59
PCF11-206ENST00000533018 TCERG1LQ5VWI1 586 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 GRAMD4Q6IC98 578 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 LPCAT2Q7L5N7 544 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 TADA2BQ86TJ2 420 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 MIB1Q86YT6 1006 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 TERB1Q8NA31 727 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 PIGKQ92643 395 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 SEMA4DQ92854 862 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 BHMTQ93088 406 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 DUSP9Q99956 384 aaKnown RBP18.76■□□□□ 0.59
PCF11-206ENST00000533018 DUSP16Q9BY84 665 aa18.76■□□□□ 0.59
PCF11-206ENST00000533018 RMND1Q9NWS8 449 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms