RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 C3orf70A6NLC5 250 aaPredicted RBP18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 TTI1O43156 1089 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 SLC34A2O95436 690 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 EFEMP2O95967 443 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 NCAM1P13591 858 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 TFE3P19532 575 aaPredicted RBP18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 SLC5A3P53794 718 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 PSMD5Q16401 504 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 ERMARDQ5T6L9 678 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 PRSS55Q6UWB4 352 aaPredicted RBP18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 HFE2Q6ZVN8 426 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 C7orf61Q8IZ16 206 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 NUP93Q8N1F7 819 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 SLC39A11Q8N1S5 342 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 ATAD1Q8NBU5 361 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 HNRNPLLQ8WVV9 542 aaKnown RBP18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 C1orf54Q8WWF1 131 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 HERPUD2Q9BSE4 406 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 CALN1Q9BXU9 219 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 DCLK3Q9C098 648 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 RAB17Q9H0T7 212 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 PLEKHA4Q9H4M7 779 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 RC3H2Q9HBD1 1191 aaKnown RBP18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 CHST7Q9NS84 486 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 NAALADL1Q9UQQ1 740 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 BACE2Q9Y5Z0 518 aa18.94■□□□□ 0.62
ALKBH3-210ENST00000532962 M0QYT0 321 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 TNFRSF10BO14763 440 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 MDM4O15151 490 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 ENDOD1O94919 500 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 RDXP35241 583 aaKnown RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 DEUP1Q05D60 604 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 IFRD2Q12894 506 aaPredicted RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SNX1Q13596 522 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 CCNG2Q16589 344 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 TAZQ16635 292 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SYPL2Q5VXT5 272 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 BSPRYQ5W0U4 402 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 CYP4V2Q6ZWL3 525 aaPredicted RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 C16orf59Q7L2K0 433 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 ANKS1BQ7Z6G8 1248 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 RFX6Q8HWS3 928 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 FBXO22Q8NEZ5 403 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SCAMP5Q8TAC9 235 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SLC7A14Q8TBB6 771 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 GRK7Q8WTQ7 553 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 PIK3R5Q8WYR1 880 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 NT5C3BQ969T7 300 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 ZBED2Q9BTP6 218 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SNRNP25Q9BV90 132 aaKnown RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 FBXO44Q9H4M3 255 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 GDF3Q9NR23 364 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 MTRRQ9UBK8 725 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 CDY1Q9Y6F8 540 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 MTMR11A4FU01 709 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 F9P00740 461 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SOD2P04179 222 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 FYNP06241 537 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 TNFRSF8P28908 595 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 NME3Q13232 169 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 DDR2Q16832 855 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 TTC27Q6P3X3 843 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 PSRC1Q6PGN9 363 aaPredicted RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 RSPO2Q6UXX9 243 aaPredicted RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 RNF19BQ6ZMZ0 732 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SND1Q7KZF4 910 aaKnown RBP eCLIP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 BEND5Q7L4P6 421 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 BHLHA9Q7RTU4 235 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 RNF168Q8IYW5 571 aaPredicted RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 TTC13Q8NBP0 860 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 IFT81Q8WYA0 676 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 HERC2P3Q9BVR0 1158 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 GPATCH2LQ9NWQ4 482 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 R3HDM2Q9Y2K5 976 aaKnown RBP18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 PCDHB12Q9Y5F1 795 aa18.93■□□□□ 0.62
ALKBH3-210ENST00000532962 SYNJ2BP-COX16A0A087WUM0 186 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 ECEL1O95672 775 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 HAPLN1P10915 354 aaPredicted RBP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 PPM1AP35813 382 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 PTGIRP43119 386 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 GLUD2P49448 558 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 ARSEP51690 589 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 YWHAGP61981 247 aaKnown RBP eCLIP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 RPL10AP62906 217 aaKnown RBP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 LMNB2Q03252 620 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 TFDP2Q14188 446 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 DPYSL3Q14195 570 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 MGAT5BQ3V5L5 792 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 BTBD8Q5XKL5 378 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 DDX53Q86TM3 631 aaKnown RBP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 JAMLQ86YT9 394 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 PSTKQ8IV42 348 aaKnown RBP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 ARHGAP18Q8N392 663 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 ATL2Q8NHH9 583 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 ATG4AQ8WYN0 398 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 EDEM1Q92611 657 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 SEPT5Q99719 369 aaPredicted RBP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 VN1R3Q9BXE9 311 aa18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 FRMD8P1Q9BZ68 369 aaPredicted RBP18.92■□□□□ 0.62
ALKBH3-210ENST00000532962 DHX35Q9H5Z1 703 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms