RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	E2F8	A0AVK6	867 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	YJEFN3	A6XGL0	299 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370		E7ENQ6	273 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	THAP12	O43422	761 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	RALA	P11233	206 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	GNA15	P30679	374 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	GPD2	P43304	727 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	RPS9	P46781	194 aa	Known RBP	18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	PSEN1	P49768	467 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	GALK1	P51570	392 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	MTAP	Q13126	283 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	GAS6	Q14393	721 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	KLHDC10	Q6PID8	442 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370		Q6ZS52	159 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	MIB1	Q86YT6	1006 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	BBS7	Q8IWZ6	715 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	SIX6OS1	Q8N1H7	587 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	CLEC4C	Q8WTT0	213 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	ATOH1	Q92858	354 aa	Predicted RBP	18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	CYTH4	Q9UIA0	394 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	SH3BP1	Q9Y3L3	701 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	FHOD1	Q9Y613	1164 aa		18.29	■□□□□ 0.52
CTSB-223	ENST00000532370	DENND4C	Q5VZ89	1909 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	ANAPC1	Q9H1A4	1944 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	TRDMT1	O14717	391 aa	Known RBP	18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	NFATC1	O95644	943 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	CYP17A1	P05093	508 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	ZNF18	P17022	549 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	PLA2G5	P39877	138 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	EFEMP1	Q12805	493 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	RAPGEF1	Q13905	1077 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	CCIN	Q13939	588 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	DHCR24	Q15392	516 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	KLHL40	Q2TBA0	621 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	GAB4	Q2WGN9	574 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	TMEM196	Q5HYL7	178 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	FSTL4	Q6MZW2	842 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	C1orf228	Q6PIY5	440 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	RHBDF2	Q6PJF5	856 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	ARHGAP18	Q8N392	663 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	KIAA1958	Q8N8K9	716 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	EDEM1	Q92611	657 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	FAM122A	Q96E09	287 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	NAA15	Q9BXJ9	866 aa	Known RBP	18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	CHRD	Q9H2X0	955 aa		18.28	■□□□□ 0.52
CTSB-223	ENST00000532370	TICRR	Q7Z2Z1	1910 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	SLC9A3R1	O14745	358 aa	Predicted RBP	18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	HMBS	P08397	361 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	ATP1A3	P13637	1013 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	CLCN1	P35523	988 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	COPB1	P53618	953 aa	Known RBP	18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	DAOA	P59103	153 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	NR1H3	Q13133	447 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	DRAP1	Q14919	205 aa	Predicted RBP	18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	BSPRY	Q5W0U4	402 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	RSRC2	Q7L4I2	434 aa	Known RBP	18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	SLC47A2	Q86VL8	602 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	DHX40	Q8IX18	779 aa	Known RBP	18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	FAM71A	Q8IYT1	594 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	ZNF276	Q8N554	614 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	HSFY1	Q96LI6	401 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	P2RY13	Q9BPV8	354 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	FUCA2	Q9BTY2	467 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	MIS12	Q9H081	205 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	CNGB3	Q9NQW8	809 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	C2orf42	Q9NWW7	574 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	TBC1D14	Q9P2M4	693 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	LIMA1	Q9UHB6	759 aa	Known RBP	18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	RASAL2	Q9UJF2	1139 aa		18.27	■□□□□ 0.52
CTSB-223	ENST00000532370	ZNF638	Q14966	1978 aa	Known RBP	18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	SYCE3	A1L190	88 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	EPHB6	O15197	1021 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	MED7	O43513	233 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	EGF	P01133	1207 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	UCHL3	P15374	230 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	CDK11B	P21127	795 aa	Known RBP	18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	MAGEA9	P43362	315 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	AMPD2	Q01433	879 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	LY6G5C	Q5SRR4	150 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	BTBD8	Q5XKL5	378 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	HTR3D	Q70Z44	454 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	APTX	Q7Z2E3	356 aa	Known RBP	18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	TADA2B	Q86TJ2	420 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	PASD1	Q8IV76	773 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	SCUBE3	Q8IX30	993 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	WDTC1	Q8N5D0	677 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	EZH1	Q92800	747 aa	Predicted RBP	18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	ST7	Q9NRC1	585 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	MARCH2	Q9P0N8	246 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	USP34	Q70CQ2	3546 aa		18.26	■□□□□ 0.51
CTSB-223	ENST00000532370	LRRC10B	A6NIK2	292 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	LAMTOR5	O43504	91 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	STC2	O76061	302 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	KLKB1	P03952	638 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	OPRD1	P41143	372 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	SLC6A11	P48066	632 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	RPL34	P49207	117 aa	Known RBP	18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	PTK2	Q05397	1052 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	MESP2	Q0VG99	397 aa		18.25	■□□□□ 0.51

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