RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PPP1R10Q96QC0 940 aaKnown RBP4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 MYCBPQ99417 103 aaPredicted RBP4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 TACO1Q9BSH4 297 aaKnown RBP4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 PI4K2AQ9BTU6 479 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 SLC46A2Q9BY10 475 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 KATNBL1Q9H079 304 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 SMARCAD1Q9H4L7 1026 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 RXFP3Q9NSD7 469 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 FBXO34Q9NWN3 711 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 DNAJB11Q9UBS4 358 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 HESX1Q9UBX0 185 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 ZFP69BQ9UJL9 534 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 KCND3Q9UK17 655 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 CAMK2AQ9UQM7 478 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 RUVBL1Q9Y265 456 aaKnown RBP4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 ATP11BQ9Y2G3 1177 aa4.7□□□□□ -1.66
AC055878.1-201ENST00000531858 NPIPB15A6NHN6 443 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 LIPT2A6NK58 231 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 M0QYG6 137 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ABLIM1O14639 778 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 BCAT2O15382 392 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ZSCAN9O15535 394 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 SLC7A4O43246 635 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 TBX10O75333 385 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 TAF5LO75529 589 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 METTL18O95568 372 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 HPXP02790 462 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 JUNP05412 331 aaKnown RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ATXN1LP0C7T5 689 aaKnown RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 CPA1P15085 419 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 FOSL1P15407 271 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 HNF4AP41235 474 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ZNF131P52739 623 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ZNF135P52742 658 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 PSMC1P62191 440 aaKnown RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 UBXN1Q04323 297 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 SF3A3Q12874 501 aaKnown RBP eCLIP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 EIF2B5Q13144 721 aaKnown RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 KIR3DS1Q14943 382 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 GAGE13Q4V321 117 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 CRB2Q5IJ48 1285 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 RALGPS1Q5JS13 557 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 TRIM68Q6AZZ1 485 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 HMBOX1Q6NT76 420 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 TMEM154Q6P9G4 183 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 SARM1Q6SZW1 724 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ZFPM1Q8IX07 1006 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 SP8Q8IXZ3 490 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ADGRF2Q8IZF7 708 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 NUP93Q8N1F7 819 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 PTGR2Q8N8N7 351 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 REPS2Q8NFH8 660 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 PIGOQ8TEQ8 1089 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 LENG8Q96PV6 779 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 RAB3IPQ96QF0 476 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 PHF7Q9BWX1 381 aaPredicted RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 TRIM5Q9C035 493 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 RXFP1Q9HBX9 757 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 EHD2Q9NZN4 543 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 KCND2Q9NZV8 630 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 ANGEL1Q9UNK9 670 aaKnown RBP4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 BTBD3Q9Y2F9 522 aa4.69□□□□□ -1.66
AC055878.1-201ENST00000531858 GXYLT2A0PJZ3 443 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 C16orf96A6NNT2 1141 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 PEX12O00623 359 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 KIAA0391O15091 583 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 WDR46O15213 610 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 HMMRO75330 724 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 RPP40O75818 363 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 MED26O95402 600 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 TGDSO95455 350 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 AFPP02771 609 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 THEGLP0DJG4 465 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 RAP2AP10114 183 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 NFKBIAP25963 317 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 KIF5BP33176 963 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 HADHAP40939 763 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 PNPLA4P41247 253 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 ETV4P43268 484 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 MAGEA10P43363 369 aaPredicted RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 EIF3BP55884 814 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 DCTN2Q13561 401 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 ADIPOQQ15848 244 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 KRTCAP3Q53RY4 240 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 ZNF484Q5JVG2 852 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 ZNF569Q5MCW4 686 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 KAZNQ674X7 775 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 KRT80Q6KB66 452 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 NCEH1Q6PIU2 408 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 CPLX2Q6PUV4 134 aaKnown RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 CATSPER4Q7RTX7 472 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 C17orf53Q8N3J3 647 aaPredicted RBP4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 FAM71DQ8N9W8 422 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 TNIP2Q8NFZ5 429 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 SHKBP1Q8TBC3 707 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 NEK9Q8TD19 979 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 DEPDC1BQ8WUY9 529 aa4.68□□□□□ -1.66
AC055878.1-201ENST00000531858 RUFY2Q8WXA3 655 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms