RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 IL9RQ01113 521 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 MYO1EQ12965 1108 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 BYSLQ13895 437 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 FUT11Q495W5 492 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 HSF5Q4G112 596 aaPredicted RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 KCNT1Q5JUK3 1230 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 DCAF12L1Q5VU92 463 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 TDRD10Q5VZ19 366 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 GRAMD4Q6IC98 578 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 PAQR9Q6ZVX9 377 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 FAM124AQ86V42 546 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 RDH13Q8NBN7 331 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 OR6B3Q8NGW1 331 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 BAHD1Q8TBE0 780 aaPredicted RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 C8orf48Q96LL4 319 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 CLIC6Q96NY7 704 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 ACCSQ96QU6 501 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 PANK2Q9BZ23 570 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 MKRN2Q9H000 416 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 EIF2B4Q9UI10 523 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 SH3BP1Q9Y3L3 701 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 RAI2Q9Y5P3 530 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 A0A087X0B3 334 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 E2F8A0AVK6 867 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 TRIM66O15016 1216 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 NCAM1P13591 858 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 TYRP14679 529 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 IDEP14735 1019 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 YWHAQP27348 245 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 GJB2P29033 226 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 HOXD13P35453 343 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 GNL1P36915 607 aaPredicted RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 CSNK1EP49674 416 aaKnown RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 PDE6CP51160 858 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 POSTNQ15063 836 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 HLA-BQ31612 363 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 ARL6IP4Q66PJ3 421 aaKnown RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 SCARA5Q6ZMJ2 495 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 TMPRSS7Q7RTY8 843 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 SYCP3Q8IZU3 236 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 JAKMIP2Q96AA8 810 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 ANKRD36BP1Q96IX9 119 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 SLITRK1Q96PX8 696 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 GABRG3Q99928 467 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 BBS2Q9BXC9 721 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 SDCBP2Q9H190 292 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 SNX25Q9H3E2 840 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 SMYD3Q9H7B4 428 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 TM7SF3Q9NS93 570 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 OSER1Q9NX31 292 aa9.51□□□□□ -0.89
USF1-210ENST00000531842 WSB2Q9NYS7 404 aaPredicted RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 APOBEC2Q9Y235 224 aaKnown RBP9.51□□□□□ -0.89
USF1-210ENST00000531842 PLK4O00444 970 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 TLX3O43711 291 aaPredicted RBP9.5□□□□□ -0.89
USF1-210ENST00000531842 CISD3P0C7P0 127 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
USF1-210ENST00000531842 CCDC130P13994 396 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 CD6P30203 668 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 DPP6P42658 865 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 SLC5A3P53794 718 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 MYL6P60660 151 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 SLC14A1Q13336 389 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
USF1-210ENST00000531842 PRAMEF14Q5SWL7 426 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 HECTD3Q5T447 861 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 FAM173BQ6P4H8 233 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 DHRS13Q6UX07 377 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 GPRIN1Q7Z2K8 1008 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 TRAPPC11Q7Z392 1133 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 GPD1LQ8N335 351 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 ZMIZ2Q8NF64 920 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 SNX19Q92543 992 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 ZNF516Q92618 1163 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 AK8Q96MA6 479 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
USF1-210ENST00000531842 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 TBC1D14Q9P2M4 693 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 NXF1Q9UBU9 619 aaKnown RBP9.5□□□□□ -0.89
USF1-210ENST00000531842 HMGXB4Q9UGU5 601 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 CLEC4EQ9ULY5 219 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 STARD13Q9Y3M8 1113 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 SNX11Q9Y5W9 270 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 CLIC4Q9Y696 253 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 STON1Q9Y6Q2 735 aa9.5□□□□□ -0.89
USF1-210ENST00000531842 ARID1BQ8NFD5 2236 aaPredicted RBP9.5□□□□□ -0.89
USF1-210ENST00000531842 A0A1B0GTW7 788 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 A8MXQ7 604 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 CLIC2O15247 247 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms