RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 NUDT18Q6ZVK8 323 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 RABEPKQ7Z6M1 372 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 ZNF513Q8N8E2 541 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-212ENST00000531625 RDH13Q8NBN7 331 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 XYLT2Q9H1B5 865 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 HOOK1Q9UJC3 728 aaKnown RBP20.19■□□□□ 0.82
UBXN1-212ENST00000531625 SH3BP1Q9Y3L3 701 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 FAM92AA1XBS5 289 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
UBXN1-212ENST00000531625 TULP3O75386 442 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 MYL1P05976 194 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 ZDHHC11BP0C7U3 371 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 UNC13DQ70J99 1090 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 TERB1Q8NA31 727 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 VRTNQ9H8Y1 702 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 CAPN10Q9HC96 672 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 SPHK2Q9NRA0 654 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 COMMD8Q9NX08 183 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 CHORDC1Q9UHD1 332 aaPredicted RBP20.18■□□□□ 0.82
UBXN1-212ENST00000531625 MSRB2Q9Y3D2 182 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 STARD13Q9Y3M8 1113 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 ATP8B3O60423 1300 aa20.18■□□□□ 0.82
UBXN1-212ENST00000531625 HYAL3O43820 417 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 CFIP05156 583 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 SERPINF2P08697 491 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 GABRG2P18507 467 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 ATXN3P54252 364 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 MYL6P60660 151 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 SIM1P81133 766 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 RPL6Q02878 288 aaKnown RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 GFPT1Q06210 699 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 TRPC3Q13507 836 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 PNOCQ13519 176 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 BBS7Q8IWZ6 715 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 HDDC3Q8N4P3 179 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 NAT16Q8N8M0 369 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 SCAMP5Q8TAC9 235 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 ZCCHC14Q8WYQ9 949 aaKnown RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 ZNF516Q92618 1163 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 SYAP1Q96A49 352 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 KCNK16Q96T55 309 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 GZF1Q9H116 711 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 NXF1Q9UBU9 619 aaKnown RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 HCN2Q9UL51 889 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 UBE4BO95155 1302 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 ATXN2Q99700 1313 aaKnown RBP20.17■□□□□ 0.82
UBXN1-212ENST00000531625 CEP192Q8TEP8 1941 aa20.17■□□□□ 0.82
UBXN1-212ENST00000531625 NBEAQ8NFP9 2946 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 PVALEFA0A1B0GWK0 134 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 H0Y626 953 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 TRIM16O95361 564 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 NTSR1P30989 418 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 CYP2J2P51589 502 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 SLC5A3P53794 718 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 FAM26FQ5R3K3 315 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 C10orf76Q5T2E6 689 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 KIAA1211LQ6NV74 962 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 PAQR9Q6ZVX9 377 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 FAM35AQ86V20 835 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 TMEM25Q86YD3 366 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 CCSER2Q9H7U1 834 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 DMAP1Q9NPF5 467 aaPredicted RBP20.16■□□□□ 0.82
UBXN1-212ENST00000531625 EXOC1Q9NV70 894 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 CALCOCO1Q9P1Z2 691 aa20.16■□□□□ 0.82
UBXN1-212ENST00000531625 LAMA5O15230 3695 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 SPAARA0A1B0GVQ0 90 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 A0A1W2PQF6 199 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 FAM221BA6H8Z2 402 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 CLIC2O15247 247 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 ZNF217O75362 1048 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 RPN1P04843 607 aaKnown RBP20.15■□□□□ 0.82
UBXN1-212ENST00000531625 HOXB2P14652 356 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 ZNF33AQ06730 810 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 DPYDQ12882 1025 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 ANO4Q32M45 955 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 C12orf56Q8IXR9 622 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
UBXN1-212ENST00000531625 SMARCD1Q96GM5 515 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 TNIP3Q96KP6 325 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 CD248Q9HCU0 757 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 CGNQ9P2M7 1197 aaKnown RBP20.15■□□□□ 0.82
UBXN1-212ENST00000531625 KLK13Q9UKR3 277 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 PCDH15Q96QU1 1955 aa20.15■□□□□ 0.82
UBXN1-212ENST00000531625 ADAMTS9Q9P2N4 1935 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 IGHV1OR15-9A0A0B4J2B8 117 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 KLRC4O43908 158 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 OPHN1O60890 802 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 RDXP35241 583 aaKnown RBP20.14■□□□□ 0.81
UBXN1-212ENST00000531625 EHHADHQ08426 723 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 HNRNPDQ14103 355 aaKnown RBP20.14■□□□□ 0.81
UBXN1-212ENST00000531625 KMT5BQ4FZB7 885 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 HTR3DQ70Z44 454 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 MIB1Q86YT6 1006 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 SCFD1Q8WVM8 642 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 WBP2Q969T9 261 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 MED10Q9BTT4 135 aa20.14■□□□□ 0.81
UBXN1-212ENST00000531625 GTPBP2Q9BX10 602 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms