RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 ZNF12P17014 697 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 JUNBP17275 347 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ARF4P18085 180 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PKLRP30613 574 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 STAT2P52630 851 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ATP6V0D1P61421 351 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 NOP14P78316 857 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 LACTBP83111 547 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 KIF23Q02241 960 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 EXOSC9Q06265 439 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 RIPPLY1Q0D2K3 151 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FRG1Q14331 258 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 R3HDM1Q15032 1099 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ZNF124Q15973 351 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PTGISQ16647 500 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 GLE1Q53GS7 698 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 HERC4Q5GLZ8 1057 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 BMP2KLQ5H9B9 411 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 RALGPS1Q5JS13 557 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 CLVS2Q5SYC1 327 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FAM180BQ6P0A1 224 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 TRIM65Q6PJ69 517 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 OLFM4Q6UX06 510 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 C4orf22Q6V702 233 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 RBM43Q6ZSC3 357 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 CBLL1Q75N03 491 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SPATC1Q76KD6 591 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 TRPM8Q7Z2W7 1104 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 UBE3BQ7Z3V4 1068 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ZER1Q7Z7L7 766 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FERMT3Q86UX7 667 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 JAMLQ86YT9 394 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SYTL1Q8IYJ3 562 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ATP6V0D2Q8N8Y2 350 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ZNF565Q8N9K5 539 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 DNAAF3Q8N9W5 541 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 MLKLQ8NB16 471 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 NOA1Q8NC60 698 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 RNF169Q8NCN4 708 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 OR6C4Q8NGE1 309 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 OR6S1Q8NH40 331 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 LILRB4Q8NHJ6 448 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FBXO30Q8TB52 745 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 MYCBPAPQ8TBZ2 947 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 TEX47Q8TBZ9 253 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SLC2A14Q8TDB8 520 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 AGAP11Q8TF27 550 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 BTN2A2Q8WVV5 523 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SEPT1Q8WYJ6 367 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 TSR2Q969E8 191 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ABTB1Q969K4 478 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 HDAC11Q96DB2 347 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 TSNARE1Q96NA8 513 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ACAP3Q96P50 834 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PPP1R10Q96QC0 940 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 MED15Q96RN5 788 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 CDC6Q99741 560 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SELENOSQ9BQE4 189 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 HEPHQ9BQS7 1158 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 MTMR12Q9C0I1 747 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 CCSER1Q9C0I3 900 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PITHD1Q9GZP4 211 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 C6orf62Q9GZU0 229 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PLEKHA4Q9H4M7 779 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 LRRC19Q9H756 370 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FANCEQ9HB96 536 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 KCNMB3Q9NPA1 279 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ERVK13-1Q9NX77 482 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PAQR5Q9NXK6 330 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ARHGEF38Q9NXL2 777 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ZNF624Q9P2J8 865 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 THEGQ9P2T0 379 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ATP6V1HQ9UI12 483 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FAF1Q9UNN5 650 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 CTNND2Q9UQB3 1225 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ZDHHC9Q9Y397 364 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 CHTOPQ9Y3Y2 248 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 MTF2Q9Y483 593 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 OAS3Q9Y6K5 1087 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FMN1Q68DA7 1419 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 GRIN2BQ13224 1484 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 ZNF335Q9H4Z2 1342 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 NPHP3-ACAD11A0A0J9YXS1 232 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 A0A1W2PQ27 194 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 A0A1W2PQ64 194 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 A0A1W2PQC6 194 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 A0A1W2PQD8 194 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 USP27XA6NNY8 438 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 KRIT1O00522 736 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 POLR2DO15514 142 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 SLC7A4O43246 635 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 GATCO43716 136 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 N4BP1O75113 896 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 NIPSNAP2O75323 286 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 JRKO75564 520 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 UFL1O94874 794 aa5.01□□□□□ -1.61
ECHDC1-221ENST00000531582 INMTO95050 263 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms