RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 MS4A7Q9GZW8 240 aaPredicted RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 SAYSD1Q9NPB0 183 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 VSX1Q9NZR4 365 aaPredicted RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 BCCIPQ9P287 314 aaKnown RBP eCLIP5.07□□□□□ -1.6
USP47-211ENST00000531513 XPR1Q9UBH6 696 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 SRP68Q9UHB9 627 aaKnown RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 HERC5Q9UII4 1024 aaKnown RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 HDAC9Q9UKV0 1011 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 CAPN11Q9UMQ6 739 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 A0A0B4J269 797 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 CCDC151A5D8V7 595 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 ZNF785A8K8V0 405 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 PRSS47A8MTI9 375 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 TISP43B9A030 160 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 B9A039 149 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 hCG_1984214I3L0E3 225 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 MPPED1O15442 326 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 PROM1O43490 865 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 CD4P01730 458 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 CELA2AP08217 269 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 ELFN1P0C7U0 828 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 ACVR2AP27037 513 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 CTGFP29279 349 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 ADD2P35612 726 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 GRIA3P42263 894 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 ZNF135P52742 658 aaPredicted RBP5.06□□□□□ -1.6
USP47-211ENST00000531513 EFR3AQ14156 821 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 SLC29A2Q14542 456 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 ADCK5Q3MIX3 580 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 UTP14CQ5TAP6 766 aaKnown RBP5.06□□□□□ -1.6
USP47-211ENST00000531513 ANKRD45Q5TZF3 282 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 KAZNQ674X7 775 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 MZT2BQ6NZ67 158 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 FAM180BQ6P0A1 224 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 AMIGO2Q86SJ2 522 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 KRT73Q86Y46 540 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 GATAD2AQ86YP4 633 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 CCDC89Q8N998 374 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 HASPINQ8TF76 798 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 UBE2Q2Q8WVN8 375 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 FBXL20Q96IG2 436 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 PYM1Q9BRP8 204 aaKnown RBP5.06□□□□□ -1.6
USP47-211ENST00000531513 DHX36Q9H2U1 1008 aaKnown RBP5.06□□□□□ -1.6
USP47-211ENST00000531513 UBN1Q9NPG3 1134 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 HEYLQ9NQ87 328 aaPredicted RBP5.06□□□□□ -1.6
USP47-211ENST00000531513 AGAP1Q9UPQ3 857 aa5.06□□□□□ -1.6
USP47-211ENST00000531513 LOC102723971A0A1B0GUV8 181 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 A0A1W2PS29 197 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 DYTNA2CJ06 578 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 HOXC11O43248 304 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 ASNA1O43681 348 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 CHEK2O96017 543 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 ITGA2BP08514 1039 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 PIM1P11309 404 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 XRCC6P12956 609 aaKnown RBP eCLIP5.05□□□□□ -1.6
USP47-211ENST00000531513 NPPBP16860 134 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 XBP1P17861 261 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 EGR1P18146 543 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 ITPKBP27987 946 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 CST5P28325 142 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 WNT3P56703 355 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 MAPK7Q13164 816 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 NPY5RQ15761 445 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 TMTC4Q5T4D3 741 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 VPS53Q5VIR6 699 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 FAM160B1Q5W0V3 765 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 PLAG1Q6DJT9 500 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 ZNF425Q6IV72 752 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 CFAP161Q6P656 301 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 KLHL17Q6TDP4 642 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 CRTC1Q6UUV9 634 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 TBC1D1Q86TI0 1168 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 CPOQ8IVL8 374 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 HERC6Q8IVU3 1022 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 CCDC117Q8IWD4 279 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 LPIN2Q92539 896 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 HDAC2Q92769 488 aaKnown RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 MAELQ96JY0 434 aaKnown RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 TLR10Q9BXR5 811 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 TINAGL1Q9GZM7 467 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 SIK2Q9H0K1 926 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 PCDHAC1Q9H158 963 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 MLXIPQ9HAP2 919 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 SMC4Q9NTJ3 1288 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 INTS13Q9NVM9 706 aa5.05□□□□□ -1.6
USP47-211ENST00000531513 ZMYND8Q9ULU4 1186 aaPredicted RBP5.05□□□□□ -1.6
USP47-211ENST00000531513 A6NLC8 198 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 M0QYG6 137 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 RAB27BO00194 218 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 TIMM44O43615 452 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 AGFG2O95081 481 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 IFIT1P09914 478 aaKnown RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 CYP2C9P11712 490 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 CAPN3P20807 821 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 KRT9P35527 623 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 CPT1AP50416 773 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 TUBP50607 506 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 PAPOLAP51003 745 aaKnown RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 PNLIPRP1P54315 467 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms