RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ITGA8P53708 1063 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 TIAL1Q01085 375 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPRK-220ENST00000531466 RAB32Q13637 225 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 ASIC2Q16515 512 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 FAM110CQ1W6H9 321 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 EARS2Q5JPH6 523 aaKnown RBP5.43□□□□□ -1.54
PTPRK-220ENST00000531466 ATAT1Q5SQI0 421 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 RNF187Q5TA31 235 aaPredicted RBP5.43□□□□□ -1.54
PTPRK-220ENST00000531466 C1GALT1C1Q96EU7 318 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 LMLNQ96KR4 655 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 DNMT3BQ9UBC3 853 aaKnown RBP5.43□□□□□ -1.54
PTPRK-220ENST00000531466 COG5Q9UP83 839 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 A0A1W2PPL8 197 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 IFITM10A6NMD0 228 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 CTIFO43310 598 aaKnown RBP5.42□□□□□ -1.54
PTPRK-220ENST00000531466 NDUFB8O95169 186 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 PLAUP00749 431 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 CD63P08962 238 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 TNFRSF8P28908 595 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 PPATQ06203 517 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 FHL3Q13643 280 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 RFX8Q6ZV50 586 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 RFX6Q8HWS3 928 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 DPH1Q9BZG8 443 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 SMURF2Q9HAU4 748 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 TRIM36Q9NQ86 728 aa5.42□□□□□ -1.54
PTPRK-220ENST00000531466 TMEM272A0A1B0GTI8 110 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 AGPSO00116 658 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 FOXN3O00409 490 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-220ENST00000531466 RRHO14718 337 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 HTR1BP28222 390 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 GPC5P78333 572 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 ZBTB46Q86UZ6 589 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 METTL25Q8N6Q8 603 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 NGDNQ8NEJ9 315 aaKnown RBP5.41□□□□□ -1.54
PTPRK-220ENST00000531466 OR56A3Q8NH54 315 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 PPP1R9BQ96SB3 815 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 ZMAT3Q9HA38 289 aaKnown RBP5.41□□□□□ -1.54
PTPRK-220ENST00000531466 MLXIPLQ9NP71 852 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 XPNPEP3Q9NQH7 507 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 DECR2Q9NUI1 292 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 ARL8BQ9NVJ2 186 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 MSRB1Q9NZV6 116 aa5.41□□□□□ -1.54
PTPRK-220ENST00000531466 ZNF814B7Z6K7 855 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 H7C4K7 107 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 OFD1O75665 1012 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 EPN2O95208 641 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 NCLP19338 710 aaKnown RBP5.4□□□□□ -1.54
PTPRK-220ENST00000531466 PGDP52209 483 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 INPP5JQ15735 1006 aaPredicted RBP5.4□□□□□ -1.54
PTPRK-220ENST00000531466 INSCQ1MX18 579 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 IFIT1BQ5T764 474 aaKnown RBP5.4□□□□□ -1.54
PTPRK-220ENST00000531466 FAM57BQ71RH2 274 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 DAAM2Q86T65 1068 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 TMEM199Q8N511 208 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 PNPLA1Q8N8W4 532 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 DIS3LQ8TF46 1054 aaKnown RBP5.4□□□□□ -1.54
PTPRK-220ENST00000531466 NUAK2Q9H093 628 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 FZD4Q9ULV1 537 aa5.4□□□□□ -1.54
PTPRK-220ENST00000531466 PRAMEF2O60811 474 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 PF4V1P10720 104 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 VCAM1P19320 739 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 PTDSS1P48651 473 aaKnown RBP5.39□□□□□ -1.55
PTPRK-220ENST00000531466 GATMP50440 423 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 ODF3L2Q3SX64 289 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 ZNF324BQ6AW86 544 aaPredicted RBP5.39□□□□□ -1.55
PTPRK-220ENST00000531466 COL23A1Q86Y22 540 aaPredicted RBP5.39□□□□□ -1.55
PTPRK-220ENST00000531466 DENND1CQ8IV53 801 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 MAML1Q92585 1016 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 SPSB4Q96A44 273 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 FCRL5Q96RD9 977 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 NUP88Q99567 741 aaPredicted RBP5.39□□□□□ -1.55
PTPRK-220ENST00000531466 SLC12A5Q9H2X9 1139 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 IP6K2Q9UHH9 426 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 RIMKLBQ9ULI2 386 aa5.39□□□□□ -1.55
PTPRK-220ENST00000531466 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 A0A1W2PPC1 479 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 SLC22A23A1A5C7 686 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 AP1G1O43747 822 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
PTPRK-220ENST00000531466 HOXB2P14652 356 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 ADRA1DP25100 572 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 ARRB2P32121 409 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 ALDH7A1P49419 539 aaKnown RBP5.38□□□□□ -1.55
PTPRK-220ENST00000531466 CAPRIN2Q6IMN6 1127 aaKnown RBP5.38□□□□□ -1.55
PTPRK-220ENST00000531466 CHPFQ8IZ52 775 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 CHMP4CQ96CF2 233 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 MEIS3Q99687 375 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 ZNF518BQ9C0D4 1074 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 A1CFQ9NQ94 594 aaKnown RBP5.38□□□□□ -1.55
PTPRK-220ENST00000531466 GABBR1Q9UBS5 961 aa5.38□□□□□ -1.55
PTPRK-220ENST00000531466 NKX1-2Q9UD57 310 aaPredicted RBP5.38□□□□□ -1.55
PTPRK-220ENST00000531466 TCF20Q9UGU0 1960 aaKnown RBP5.37□□□□□ -1.55
PTPRK-220ENST00000531466 A8MVJ9 347 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 CA12O43570 354 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 UBXN7O94888 489 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 PARP1P09874 1014 aaKnown RBP5.37□□□□□ -1.55
PTPRK-220ENST00000531466 PGGT1BP53609 377 aa5.37□□□□□ -1.55
PTPRK-220ENST00000531466 P2RX3P56373 397 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms