RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SYT12Q8IV01 421 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 C12orf29Q8N999 325 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 TERB1Q8NA31 727 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 DEFB124Q8NES8 71 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 GOLGA5Q8TBA6 731 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 FSCN3Q9NQT6 498 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 DMAC2Q9NW81 257 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 EVLQ9UI08 416 aaPredicted RBP19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 RALYQ9UKM9 306 aaKnown RBP19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 DSPP15924 2871 aaKnown RBP19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 PROS1P07225 676 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 ZSCAN22P10073 491 aaPredicted RBP19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 GABRG2P18507 467 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 CSRP1P21291 193 aaKnown RBP19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 LYSMD4Q5XG99 296 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 GPRIN1Q7Z2K8 1008 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 JAKMIP2Q96AA8 810 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 NUSAP1Q9BXS6 441 aaKnown RBP19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 BACH2Q9BYV9 841 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 COMMD8Q9NX08 183 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 WASF3Q9UPY6 502 aa19.48■□□□□ 0.71
SSSCA1-206ENST00000531405 NEDD8-MDP1E9PL57 170 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 CYP26A1O43174 497 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 GREM1O60565 184 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 F13A1P00488 732 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 CEACAM1P13688 526 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 HOXB2P14652 356 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 ENGP17813 658 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 ADORA2BP29275 332 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 ASPAP45381 313 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 LMAN2Q12907 356 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 SGSM1Q2NKQ1 1148 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 ZACNQ401N2 412 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 KMT5BQ4FZB7 885 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 EGFLAMQ63HQ2 1017 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 UNQ6494/PRO21346Q6UXR6 183 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 TRMT11Q7Z4G4 463 aaKnown RBP19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 CEP57L1Q8IYX8 460 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 ACOX2Q99424 681 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 DUSP9Q99956 384 aaKnown RBP19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 KLF16Q9BXK1 252 aaPredicted RBP19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 KCTD10Q9H3F6 313 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 CSNK1G1Q9HCP0 422 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 TLR8Q9NR97 1041 aaKnown RBP19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 EXOC1Q9NV70 894 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 DNAJC17Q9NVM6 304 aaKnown RBP19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 OSER1Q9NX31 292 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 CALCOCO1Q9P1Z2 691 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 PILRBQ9UKJ0 227 aa19.47■□□□□ 0.71
SSSCA1-206ENST00000531405 ACTN4O43707 911 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 NR3C1P04150 777 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 CFIP05156 583 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 P4HA1P13674 534 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 RPL6Q02878 288 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 PKP1Q13835 747 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 BYSLQ13895 437 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 GRAMD4Q6IC98 578 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 TPGS1Q6ZTW0 290 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 HTR3DQ70Z44 454 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 SV2AQ7L0J3 742 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 SLC9A9Q8IVB4 645 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 CRYBG2Q8N1P7 616 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 PAGE5Q96GU1 130 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 BBS2Q9BXC9 721 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 FBXO44Q9H4M3 255 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 NUDT5Q9UKK9 219 aa19.46■□□□□ 0.71
SSSCA1-206ENST00000531405 NBEAQ8NFP9 2946 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 ZFYVE26Q68DK2 2539 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 A0A1W2PQF6 199 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 MDM4O15151 490 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 ASS1P00966 412 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 HLA-DRAP01903 254 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 SLFN14P0C7P3 912 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 FAM200BP0CF97 657 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 TYRP14679 529 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 NTSR1P30989 418 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 PIK3CAP42336 1068 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 PREPLQ4J6C6 727 aaPredicted RBP19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 C1orf220Q5T0J3 134 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 CEP135Q66GS9 1140 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 KIAA1211LQ6NV74 962 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 SLC23A3Q6PIS1 610 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 CLEC20AQ6ZU45 233 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 TOGARAM2Q6ZUX3 1019 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 KCNV2Q8TDN2 545 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 NMUR1Q9HB89 426 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 CACNA1GO43497 2377 aa19.45■□□□□ 0.7
SSSCA1-206ENST00000531405 PRRT4C9JH25 899 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 HHLA1C9JL84 531 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 AP5Z1O43299 807 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 CACNG3O60359 315 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 RPN1P04843 607 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 ATP5C1P36542 298 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 DNM1Q05193 864 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 SPDYCQ5MJ68 293 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 PEAR1Q5VY43 1037 aaPredicted RBP19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 NUDT18Q6ZVK8 323 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 UNC93AQ86WB7 457 aa19.44■□□□□ 0.7
SSSCA1-206ENST00000531405 CHPFQ8IZ52 775 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms