RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ESPNB1AK53 854 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 GLI1P08151 1106 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 MYL4P12829 197 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ATP11AP98196 1134 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 CDO1Q16878 200 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 C15orf59Q2T9L4 293 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 DAB2IPQ5VWQ8 1189 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 TMC5Q6UXY8 1006 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 RTL10Q7L3V2 364 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 DAAM2Q86T65 1068 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ARHGAP18Q8N392 663 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 EFHBQ8N7U6 833 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 CASP10Q92851 521 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 TRMT2BQ96GJ1 504 aaKnown RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 MYRFLQ96LU7 910 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 UXTQ9UBK9 157 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 IP6K2Q9UHH9 426 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 SYNJ2BP-COX16A0A087WUM0 186 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 XYLBO75191 536 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 HNRNPA1P09651 372 aaKnown RBP eCLIP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 TFE3P19532 575 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 SDC4P31431 198 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 MATKP42679 507 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 HADHBP55084 474 aaKnown RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 GNG11P61952 73 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ZNF252P-AS1Q0IIN9 211 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 KCNC3Q14003 757 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 CCDC14Q49A88 953 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 Q7L0L9 218 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 RSRC2Q7L4I2 434 aaKnown RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ADAM32Q8TC27 787 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 C16orf45Q96MC5 204 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 SLC2A13Q96QE2 648 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 GAS2L1Q99501 681 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-205ENST00000531303 PRKD2Q9BZL6 878 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 PIDD1Q9HB75 910 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ASAH2Q9NR71 780 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ABCC13Q9NSE7 274 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 ZDHHC7Q9NXF8 308 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 TRPM5Q9NZQ8 1165 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 COX16Q9P0S2 106 aa19.92■□□□□ 0.78
SMPD1-205ENST00000531303 PROSCO94903 275 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 GLP2RO95838 553 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 FTCDO95954 541 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 RARGP13631 454 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 TNNT1P13805 278 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 PTPN2P17706 415 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 GABRR2P28476 465 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 SSR1P43307 286 aaKnown RBP19.91■□□□□ 0.78
SMPD1-205ENST00000531303 SULT1E1P49888 294 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 ZNF143P52747 638 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-205ENST00000531303 PITX1P78337 314 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-205ENST00000531303 RARS2Q5T160 578 aaKnown RBP19.91■□□□□ 0.78
SMPD1-205ENST00000531303 SH3PXD2AQ5TCZ1 1133 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 RNF139Q8WU17 664 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 ALS2CR12Q96Q35 445 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 DDX23Q9BUQ8 820 aaKnown RBP19.91■□□□□ 0.78
SMPD1-205ENST00000531303 DNMT3BQ9UBC3 853 aaKnown RBP19.91■□□□□ 0.78
SMPD1-205ENST00000531303 ANAPC1Q9H1A4 1944 aa19.91■□□□□ 0.78
SMPD1-205ENST00000531303 ZNF840PA6NDX5 716 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 RALAP11233 206 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 GJA1P17302 382 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 HOXA9P31269 272 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 NOS2P35228 1153 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 NTHL1P78549 312 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 RAB6CQ53S08 254 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 ARCQ7LC44 396 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 GRASPQ7Z6J2 395 aaPredicted RBP19.9■□□□□ 0.78
SMPD1-205ENST00000531303 TMC8Q8IU68 726 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 SLC35F6Q8N357 371 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 LRRC57Q8N9N7 239 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 PDZD8Q8NEN9 1154 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 SMG7Q92540 1137 aaKnown RBP19.9■□□□□ 0.78
SMPD1-205ENST00000531303 ZNF707Q96C28 371 aaPredicted RBP19.9■□□□□ 0.78
SMPD1-205ENST00000531303 TBCBQ99426 244 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 CNPY3Q9BT09 278 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 TRIM62Q9BVG3 475 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 LRRC3Q9BY71 257 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 RAB6CQ9H0N0 254 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 CCSER2Q9H7U1 834 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 SFXN1Q9H9B4 322 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 IL21Q9HBE4 155 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 DZANK1Q9NVP4 752 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 ALG6Q9Y672 507 aa19.9■□□□□ 0.78
SMPD1-205ENST00000531303 MDM4O15151 490 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 TADA3O75528 432 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 TBX18O95935 607 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 F11P03951 625 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 ZDHHC11BP0C7U3 371 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 SRGAP2BP0DMP2 458 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 COMTP21964 271 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 PSEN1P49768 467 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 NME3Q13232 169 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 PIGHQ14442 188 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-205ENST00000531303 C10orf120Q5SQS8 335 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 C11orf63Q6NUN7 778 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 TMEM150AQ86TG1 271 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 FNIP1Q8TF40 1166 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 FAM172AQ8WUF8 416 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 OVCA2Q8WZ82 227 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms