RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 CILPO75339 1184 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 CST3P01034 146 aaPredicted RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 FAM163BP0C2L3 166 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 TMEM191BP0C7N4 346 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 CD6P30203 668 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 LONP1P36776 959 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 GNL1P36915 607 aaPredicted RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 TUBP50607 506 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 PTPRNQ16849 979 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 HLA-BQ31612 363 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 ANO4Q32M45 955 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 HECTD3Q5T447 861 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 MCTP1Q6DN14 999 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 HTR3DQ70Z44 454 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 ZCCHC9Q8N567 271 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 KRI1Q8N9T8 703 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 CADM4Q8NFZ8 388 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 SETD7Q8WTS6 366 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 TOE1Q96GM8 510 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 MKRN2Q9H000 416 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 ITM2CQ9NQX7 267 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 MARK1Q9P0L2 795 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 SEL1LQ9UBV2 794 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 FBXO10Q9UK96 956 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 BTBD3Q9Y2F9 522 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 PCDHGB2Q9Y5G2 931 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 SLCO1B1Q9Y6L6 691 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 FRMD3A2A2Y4 597 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 FAM149AA5PLN7 773 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 EIF4E1BA6NMX2 242 aaKnown RBP11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 TK2O00142 265 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 IGLV3-19P01714 112 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 TYRP14679 529 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 C19orf57Q0VDD7 668 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 ENPP2Q13822 863 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 FUT11Q495W5 492 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 HS2ST1Q7LGA3 356 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 PDZD8Q8NEN9 1154 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 FBXO32Q969P5 355 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 UBL7Q96S82 380 aaPredicted RBP11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 CDC6Q99741 560 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 GPR174Q9BXC1 333 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 KLF16Q9BXK1 252 aaPredicted RBP11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 GZF1Q9H116 711 aaPredicted RBP11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 PRDM16Q9HAZ2 1276 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 OLFML3Q9NRN5 406 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 EXOC7Q9UPT5 735 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 SH3BP1Q9Y3L3 701 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 KNTC1P50748 2209 aa11.31□□□□□ -0.6
TM9SF1-210ENST00000530563 METTL12A8MUP2 240 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 BCAT2O15382 392 aaPredicted RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 TBX18O95935 607 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 NCAM1P13591 858 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 GAP43P17677 238 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 ACO1P21399 889 aaKnown RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 ITPKBP27987 946 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 HOXD13P35453 343 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 MATKP42679 507 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 TPMTP51580 245 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 IFRD2Q12894 506 aaPredicted RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 KIAA1324Q6UXG2 1013 aaKnown RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 CBWD2Q8IUF1 395 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 GPD1LQ8N335 351 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 SNX25Q9H3E2 840 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 PRORYQ9H606 182 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 GMIPQ9P107 970 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
TM9SF1-210ENST00000530563 A0A1B0GVT2 93 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 NEDD8-MDP1E9PL57 170 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 ATXN7O15265 892 aaPredicted RBP11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 FLRT2O43155 660 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 GCNT3O95395 438 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 CER1O95813 267 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 TNNC2P02585 160 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 C7P10643 843 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 IRF1P10914 325 aa11.29□□□□□ -0.6
TM9SF1-210ENST00000530563 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms