RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 GPD1P21695 349 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 SULT1E1P49888 294 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 ATXN1P54253 815 aaKnown RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 GSCP56915 257 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 YWHAZP63104 245 aaKnown RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 ADGRE1Q14246 886 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 BSPRYQ5W0U4 402 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 Q7L0L9 218 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 DNAJB7Q7Z6W7 309 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 ZDHHC17Q8IUH5 632 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 GOLGA1Q92805 767 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 ACSF2Q96CM8 615 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 ZNF512Q96ME7 567 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 FBXO44Q9H4M3 255 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 TMEM59LQ9UK28 342 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 UNC80Q8N2C7 3258 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 BTNL10A8MVZ5 291 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 MYO1FO00160 1098 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 MSI1O43347 362 aaKnown RBP11.14□□□□□ -0.63
SOX6-213ENST00000530378 TADA3O75528 432 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 FYNP06241 537 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 MYL4P12829 197 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 MARCKSL1P49006 195 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 NTHL1P78549 312 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 CYP4F8P98187 520 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 HYAL1Q12794 435 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 EFHC1Q5JVL4 640 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 BTBD8Q5XKL5 378 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 PM20D1Q6GTS8 502 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 SYT10Q6XYQ8 523 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 LRRC57Q8N9N7 239 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 TTC16Q8NEE8 873 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 PSMG2Q969U7 264 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 SLITRK1Q96PX8 696 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 TBCBQ99426 244 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 PSMB7Q99436 277 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 NSUN3Q9H649 340 aaKnown RBP11.14□□□□□ -0.63
SOX6-213ENST00000530378 CCSER2Q9H7U1 834 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 FAM204AQ9H8W3 233 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 TRPC7Q9HCX4 862 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 KCND1Q9NSA2 647 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 KLHL11Q9NVR0 708 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
SOX6-213ENST00000530378 CALCOCO1Q9P1Z2 691 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 HSFX1Q9UBD0 423 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 SCML2Q9UQR0 700 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 SPOPO43791 374 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 ZMYND10O75800 440 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 MTA2O94776 668 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 GLP2RO95838 553 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 TBX18O95935 607 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 CSH1P0DML2 217 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 CSH2P0DML3 217 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 COMTP21964 271 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 SDC4P31431 198 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 NME3Q13232 169 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 CCDC14Q49A88 953 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 STXBP5Q5T5C0 1151 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
SOX6-213ENST00000530378 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 RSRC2Q7L4I2 434 aaKnown RBP11.14□□□□□ -0.63
SOX6-213ENST00000530378 ELMOD1Q8N336 334 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 FAM172AQ8WUF8 416 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 POPDC2Q9HBU9 364 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 DNAI1Q9UI46 699 aa11.14□□□□□ -0.63
SOX6-213ENST00000530378 COL6A3P12111 3177 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 C2orf78A6NCI8 922 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 SART1O43290 800 aaKnown RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 PROSCO94903 275 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 RARGP13631 454 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 GABRR2P28476 465 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 MATKP42679 507 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 ZNF143P52747 638 aaPredicted RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 TAS2R40P59535 323 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 EFEMP1Q12805 493 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 IFI16Q16666 785 aaKnown RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 RARS2Q5T160 578 aaKnown RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 PEX26Q7Z412 305 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 TAC4Q86UU9 113 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 ITIH5Q86UX2 942 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 RNF10Q8N5U6 811 aaKnown RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 DQX1Q8TE96 717 aaKnown RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 IRGQQ8WZA9 623 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 PPP2R3CQ969Q6 453 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 TCEAL4Q96EI5 215 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 SLC2A13Q96QE2 648 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 TTLL2Q9BWV7 592 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 TLR8Q9NR97 1041 aaKnown RBP11.13□□□□□ -0.63
SOX6-213ENST00000530378 IL37Q9NZH6 218 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 PCSK1NQ9UHG2 260 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 IP6K2Q9UHH9 426 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms