RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SH2B3Q9UQQ2 575 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 LGALS16A8MUM7 142 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 RAB27BO00194 218 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 VNN1O95497 513 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 ACVR2AP27037 513 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 CPT1AP50416 773 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 GRM1Q13255 1194 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 INSCQ1MX18 579 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 AARS2Q5JTZ9 985 aaKnown RBP5.38□□□□□ -1.55
C11orf88-204ENST00000529661 PCID2Q5JVF3 399 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 SUMO4Q6EEV6 95 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 CEP85Q6P2H3 762 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 ANKRD16Q6P6B7 361 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 ZNF804AQ7Z570 1209 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 WDR53Q7Z5U6 358 aaPredicted RBP5.38□□□□□ -1.55
C11orf88-204ENST00000529661 KRT73Q86Y46 540 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 HASPINQ8TF76 798 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 PPP2R3CQ969Q6 453 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 RMDN3Q96TC7 470 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 FAM83DQ9H4H8 585 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 DUSP22Q9NRW4 184 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 IGSF9Q9P2J2 1179 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 FRMD4BQ9Y2L6 1034 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 GPR52Q9Y2T5 361 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 SNX14Q9Y5W7 946 aa5.38□□□□□ -1.55
C11orf88-204ENST00000529661 ARHGEF17Q96PE2 2063 aaPredicted RBP5.38□□□□□ -1.55
C11orf88-204ENST00000529661 TARM1B6A8C7 271 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 H7C4K7 107 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 PODXLO00592 558 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 ITGA8P53708 1063 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 TPTEP56180 551 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 PPFIA1Q13136 1202 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 MAPKAPK3Q16644 382 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 LY6KQ17RY6 165 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 COLEC12Q5KU26 742 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 CACHD1Q5VU97 1274 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 FBXO38Q6PIJ6 1188 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 NAPRTQ6XQN6 538 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 USP49Q70CQ1 688 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 PARS2Q7L3T8 475 aaKnown RBP5.37□□□□□ -1.55
C11orf88-204ENST00000529661 PTF1AQ7RTS3 328 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 IZUMO1Q8IYV9 350 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 SPARTQ8N0X7 666 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 ABRAQ8N0Z2 381 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 TBC1D5Q92609 795 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 TMEM120AQ9BXJ8 343 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 MAGEH1Q9H213 219 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 AS3MTQ9HBK9 375 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 GBA2Q9HCG7 927 aaPredicted RBP5.37□□□□□ -1.55
C11orf88-204ENST00000529661 HEYLQ9NQ87 328 aaPredicted RBP5.37□□□□□ -1.55
C11orf88-204ENST00000529661 DNMT3BQ9UBC3 853 aaKnown RBP5.37□□□□□ -1.55
C11orf88-204ENST00000529661 GRHPRQ9UBQ7 328 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 SERGEFQ9UGK8 458 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 ADAMTS5Q9UNA0 930 aa5.37□□□□□ -1.55
C11orf88-204ENST00000529661 SMIM22K7EJ46 135 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 SYT5O00445 386 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 ZNF213O14771 459 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 NPHP1O15259 732 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 RASAL1O95294 804 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 NPSP0C0P6 89 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 DHRS4L1P0CG22 281 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 IDEP14735 1019 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 VEGFAP15692 232 aaPredicted RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 TPH1P17752 444 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 EGR1P18146 543 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 PTDSS1P48651 473 aaKnown RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 BIRC3Q13489 604 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 ZNF750Q32MQ0 723 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 PTCHD3Q3KNS1 767 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 ARL6IP4Q66PJ3 421 aaKnown RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 DPY19L3Q6ZPD9 716 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 Q6ZWC4 215 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 CAND1Q86VP6 1230 aaKnown RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 ATG16L2Q8NAA4 619 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 DNAJB14Q8TBM8 379 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 FAM71BQ8TC56 605 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 TRAPPC12Q8WVT3 735 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 SOCS4Q8WXH5 440 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 EID2BQ96D98 161 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 PAGR1Q9BTK6 254 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 DPCDQ9BVM2 203 aaPredicted RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 TRIM5Q9C035 493 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 UBA5Q9GZZ9 404 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 MAF1Q9H063 256 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 DACT1Q9NYF0 836 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 PGAP2Q9UHJ9 254 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 ZMYND8Q9ULU4 1186 aaPredicted RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 CDY1Q9Y6F8 540 aa5.36□□□□□ -1.55
C11orf88-204ENST00000529661 COL11A2P13942 1736 aaPredicted RBP5.36□□□□□ -1.55
C11orf88-204ENST00000529661 AOX1Q06278 1338 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 AQP7P3A6NL99 342 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 ACKR2O00590 384 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 RGS10O43665 173 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 RRP9O43818 475 aaKnown RBP5.35□□□□□ -1.55
C11orf88-204ENST00000529661 SRGAP2O75044 1071 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 JTBO76095 146 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 PRKCGP05129 697 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 ITGA5P08648 1049 aa5.35□□□□□ -1.55
C11orf88-204ENST00000529661 CTGFP29279 349 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms