RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 KIAA0391O15091 583 aaKnown RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 GPR37O15354 613 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 HOXC11O43248 304 aaPredicted RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 PRPF6O94906 941 aaKnown RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 NDUFV2P19404 249 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 KCNA1Q09470 495 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 HECTD3Q5T447 861 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 TOGARAM2Q6ZUX3 1019 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 SV2BQ7L1I2 683 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 NUP93Q8N1F7 819 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 PHTF2Q8N3S3 785 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 ZSWIM2Q8NEG5 633 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 OR6B3Q8NGW1 331 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 CXorf38Q8TB03 319 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 MDM1Q8TC05 714 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 SETD7Q8WTS6 366 aaKnown RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 KBTBD7Q8WVZ9 684 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 OVCA2Q8WZ82 227 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 ZNF419Q96HQ0 510 aaPredicted RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 LRIG1Q96JA1 1093 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 XPO6Q96QU8 1125 aaKnown RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 STRA6Q9BX79 667 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 PCIF1Q9H4Z3 704 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 SPHK2Q9NRA0 654 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 STK17AQ9UEE5 414 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 STARD13Q9Y3M8 1113 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 GCN1Q92616 2671 aaKnown RBP9.55□□□□□ -0.88
VPS11-203ENST00000529545 ATP8B3O60423 1300 aa9.55□□□□□ -0.88
VPS11-203ENST00000529545 A0A1B0GTW7 788 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 A0A1W2PQF6 199 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 MEI4A8MW99 385 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 COCHO43405 550 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GJB3O75712 270 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 FAM163BP0C2L3 166 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 IDEP14735 1019 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 PTPN1P18031 435 aaKnown RBP9.54□□□□□ -0.88
VPS11-203ENST00000529545 TXLNAP40222 546 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 TNNC1P63316 161 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GRIK2Q13002 908 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 RRAGBQ5VZM2 374 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 SCARA3Q6AZY7 606 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 IL27RAQ6UWB1 636 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 KIAA1324Q6UXG2 1013 aaKnown RBP9.54□□□□□ -0.88
VPS11-203ENST00000529545 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GLRX5Q86SX6 157 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 METTL3Q86U44 580 aaKnown RBP9.54□□□□□ -0.88
VPS11-203ENST00000529545 TMEM25Q86YD3 366 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 BBS7Q8IWZ6 715 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GLIS3Q8NEA6 775 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 COL26A1Q96A83 441 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 FAM84AQ96KN4 292 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 KIF2CQ99661 725 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 CBWD1Q9BRT8 395 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 OLFML3Q9NRN5 406 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 DNAJC17Q9NVM6 304 aaKnown RBP9.54□□□□□ -0.88
VPS11-203ENST00000529545 KIAA1522Q9P206 1035 aaPredicted RBP9.54□□□□□ -0.88
VPS11-203ENST00000529545 WDR35Q9P2L0 1181 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 CHORDC1Q9UHD1 332 aaPredicted RBP9.54□□□□□ -0.88
VPS11-203ENST00000529545 RAXQ9Y2V3 346 aa9.54□□□□□ -0.88
VPS11-203ENST00000529545 GFRA2O00451 464 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 TACC1O75410 805 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 CER1O95813 267 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 IRF1P10914 325 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 MAOBP27338 520 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 CD6P30203 668 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 MATKP42679 507 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 TUBP50607 506 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 STARD3Q14849 445 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 EGFLAMQ63HQ2 1017 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 SLCO6A1Q86UG4 719 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 WDR49Q8IV35 697 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 GALNT15Q8N3T1 639 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 OR5B17Q8NGF7 314 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 ERLEC1Q96DZ1 483 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 MRGPRX1Q96LB2 322 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 CDC6Q99741 560 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 GABRG3Q99928 467 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 DUSP9Q99956 384 aaKnown RBP9.53□□□□□ -0.88
VPS11-203ENST00000529545 MRPL45Q9BRJ2 306 aaKnown RBP9.53□□□□□ -0.88
VPS11-203ENST00000529545 BBS2Q9BXC9 721 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 ZNF518BQ9C0D4 1074 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 KIAA1586Q9HCI6 787 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.88
VPS11-203ENST00000529545 DKK4Q9UBT3 224 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
VPS11-203ENST00000529545 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
VPS11-203ENST00000529545 PLXNB3Q9ULL4 1909 aa9.52□□□□□ -0.88
VPS11-203ENST00000529545 A8MXQ7 604 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 NEDD8-MDP1E9PL57 170 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 CACNG3O60359 315 aa9.52□□□□□ -0.89
VPS11-203ENST00000529545 CLSTN1O94985 981 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms