RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SLC9A1P19634 815 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 ERCC5P28715 1186 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-216ENST00000528739 SLC6A11P48066 632 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 FNTBP49356 437 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 GCNT1Q02742 428 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 ADIGQ0VDE8 80 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 STILQ15468 1287 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 EXOC3L4Q17RC7 722 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 LY6G5CQ5SRR4 150 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 RHBDF2Q6PJF5 856 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 SASS6Q6UVJ0 657 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 PRR23BQ6ZRT6 265 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 TPGS1Q6ZTW0 290 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 SCD5Q86SK9 330 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 UBR7Q8N806 425 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 KIAA1958Q8N8K9 716 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 CCDC26Q8TAB7 109 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 RNF139Q8WU17 664 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 TFAP2BQ92481 460 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 WBP2Q969T9 261 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 OTUB2Q96DC9 234 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 ZFRQ96KR1 1074 aaKnown RBP15.01□□□□□ -0.01
CAPN1-216ENST00000528739 PNKPQ96T60 521 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 FAM126AQ9BYI3 521 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-216ENST00000528739 THAP9Q9H5L6 903 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 RAB23Q9ULC3 237 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 USP3Q9Y6I4 520 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 OBSL1O75147 1896 aa15.01□□□□□ -0.01
CAPN1-216ENST00000528739 GREB1Q4ZG55 1949 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 DENND4CQ5VZ89 1909 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 SLC12A8A0AV02 714 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 LETM1O95202 739 aaPredicted RBP15□□□□□ -0.01
CAPN1-216ENST00000528739 PXNP49023 591 aaPredicted RBP15□□□□□ -0.01
CAPN1-216ENST00000528739 COG7P83436 770 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 KDSRQ06136 332 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 CNGA2Q16280 664 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 MAN2A1Q16706 1144 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 C2orf27AQ580R0 203 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 PKN3Q6P5Z2 889 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 GJB7Q6PEY0 223 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 LCLAT1Q6UWP7 414 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 MAMSTRQ6ZN01 415 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 GPT2Q8TD30 523 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 GOLGA1Q92805 767 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
CAPN1-216ENST00000528739 KREMEN1Q96MU8 473 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 MED15Q96RN5 788 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 ARHGEF4Q9NR80 690 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 SPHK2Q9NRA0 654 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 ST7Q9NRC1 585 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 CLIC5Q9NZA1 410 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 NCDNQ9UBB6 729 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 MYH10P35580 1976 aa15□□□□□ -0.01
CAPN1-216ENST00000528739 TBC1D3BA6NDS4 549 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-216ENST00000528739 NEDD8-MDP1E9PL57 170 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 THAP12O43422 761 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 MED7O43513 233 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 OPRD1P41143 372 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 DMWDQ09019 674 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 LPAL2Q16609 132 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 RAB41Q5JT25 222 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 KLHDC10Q6PID8 442 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 NUDT18Q6ZVK8 323 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 HTR3DQ70Z44 454 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 CEP68Q76N32 757 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 ENOSF1Q7L5Y1 443 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 TMEM25Q86YD3 366 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 EDEM1Q92611 657 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 BHMTQ93088 406 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 ACDQ96AP0 544 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 FAM81BQ96LP2 452 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 TUBGCP2Q9BSJ2 902 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 BBS2Q9BXC9 721 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 MIS12Q9H081 205 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 POLR3BQ9NW08 1133 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-216ENST00000528739 C2orf42Q9NWW7 574 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 MARCH2Q9P0N8 246 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.99□□□□□ -0.01
CAPN1-216ENST00000528739 COL4A2P08572 1712 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 ANAPC1Q9H1A4 1944 aa14.99□□□□□ -0.01
CAPN1-216ENST00000528739 KCNJ18B7U540 433 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 TPM2P07951 284 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 GNA15P30679 374 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 TIE1P35590 1138 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 APBA1Q02410 837 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 KCNJ12Q14500 433 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 PREPLQ4J6C6 727 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-216ENST00000528739 VWA3BQ502W6 1294 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 BSPRYQ5W0U4 402 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 LONP2Q86WA8 852 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 C12orf40Q86WS4 652 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 IRF2BP1Q8IU81 584 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 CCDC33Q8N5R6 958 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 ZBTB44Q8NCP5 570 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 XPO6Q96QU8 1125 aaKnown RBP14.98□□□□□ -0.01
CAPN1-216ENST00000528739 HHIPQ96QV1 700 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 DCLK3Q9C098 648 aa14.98□□□□□ -0.01
CAPN1-216ENST00000528739 NDST4Q9H3R1 872 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms