RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 KRT33BQ14525 404 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 MORF4L2Q15014 288 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 C12orf29Q8N999 325 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 DDI1Q8WTU0 396 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 ZIM3Q96PE6 472 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 SEZ6LQ9BYH1 1024 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 FAM96AQ9H5X1 160 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 GOLGA2P5Q9HBQ8 144 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 PCDH9Q9HC56 1237 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 NSMCE4AQ9NXX6 385 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 TCHHQ07283 1943 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 RCCD1A6NED2 376 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 RARAP10276 462 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 ZNF135P52742 658 aaPredicted RBP15.6■□□□□ 0.09
USP47-207ENST00000527733 ACLYP53396 1101 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 PTK7Q13308 1070 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 LRRC14Q15048 493 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 HERC6Q8IVU3 1022 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 GIPC2Q8TF65 315 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 NAT9Q9BTE0 207 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 ADAM33Q9BZ11 813 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.6■□□□□ 0.09
USP47-207ENST00000527733 MRPL17Q9NRX2 175 aaKnown RBP15.6■□□□□ 0.09
USP47-207ENST00000527733 NDFIP2Q9NV92 336 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 GMNCA6NCL1 334 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 BRCC3P46736 316 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 FASTKD1Q53R41 847 aaKnown RBP15.6■□□□□ 0.09
USP47-207ENST00000527733 RNF135Q8IUD6 432 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 CCNJLQ8IV13 435 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 TUBB6Q9BUF5 446 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 ARHGEF38Q9NXL2 777 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 A0A0G2JND7 137 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 RHOCP08134 193 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 RARGP13631 454 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 TPD52P55327 224 aaPredicted RBP15.6■□□□□ 0.09
USP47-207ENST00000527733 FAM183BPQ6ZVS7 135 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 SAPCD2Q86UD0 394 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 CREG2Q8IUH2 290 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 USP13Q92995 863 aaPredicted RBP15.6■□□□□ 0.09
USP47-207ENST00000527733 ABCF3Q9NUQ8 709 aa15.6■□□□□ 0.09
USP47-207ENST00000527733 GOLGA8RI6L899 631 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 NDUFS3O75489 264 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 PIGRP01833 764 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 USP41Q3LFD5 358 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 LZTR1Q8N653 840 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 MYLPFQ96A32 169 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 MRPL45Q9BRJ2 306 aaKnown RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 ZNF263O14978 683 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 SNRPAP09012 282 aaKnown RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 HSD17B3P37058 310 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 ARHGEF7Q14155 803 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 POLD3Q15054 466 aaPredicted RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 AGBL2Q5U5Z8 902 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 TTC23LQ6PF05 361 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 DCUN1D1Q96GG9 259 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 NCF2P19878 526 aaPredicted RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 AMPD1P23109 780 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 NR2C2P49116 596 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 C15orf59Q2T9L4 293 aaPredicted RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 PPP1R26Q5T8A7 1209 aaPredicted RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 SH2D3CQ8N5H7 860 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 TGS1Q96RS0 853 aaKnown RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 GPR63Q9BZJ6 419 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 LHX5Q9H2C1 402 aa15.59■□□□□ 0.09
USP47-207ENST00000527733 G3BP2Q9UN86 482 aaKnown RBP15.59■□□□□ 0.09
USP47-207ENST00000527733 A0A0U1RQJ8 604 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 SNAI1O95863 264 aaPredicted RBP15.58■□□□□ 0.09
USP47-207ENST00000527733 GLI1P08151 1106 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 TUBP50607 506 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 USP10Q14694 798 aaKnown RBP15.58■□□□□ 0.09
USP47-207ENST00000527733 SLC10A6Q3KNW5 377 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 CARNMT1Q8N4J0 409 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 FIBCD1Q8N539 461 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 TSPAN17Q96FV3 270 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 TRIM54Q9BYV2 358 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 SMPD4Q9NXE4 827 aa15.58■□□□□ 0.09
USP47-207ENST00000527733 EFCAB14O75071 495 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 TRUB2O95900 331 aaKnown RBP15.58■□□□□ 0.08
USP47-207ENST00000527733 CYP3A5P20815 502 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 PPM1AP35813 382 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 POU5F1Q01860 360 aaKnown RBP15.58■□□□□ 0.08
USP47-207ENST00000527733 FSTL1Q12841 308 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 PABPC1LQ4VXU2 614 aaKnown RBP15.58■□□□□ 0.08
USP47-207ENST00000527733 HGSNATQ68CP4 663 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 LRRC43Q8N309 656 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 CFAP61Q8NHU2 1237 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 BRD8Q9H0E9 1235 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 HSD3B7Q9H2F3 369 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 MARCH2Q9P0N8 246 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 VPS28Q9UK41 221 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 RPS6KL1Q9Y6S9 549 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 CILPO75339 1184 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 SLC10A3P09131 477 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 APBB2Q92870 758 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 KLHL29Q96CT2 875 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 TKTL2Q9H0I9 626 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 ATXN3LQ9H3M9 355 aa15.58■□□□□ 0.08
USP47-207ENST00000527733 SDR42E2A6NKP2 422 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms