RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CCDC186Q7Z3E2 898 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 TMEM176AQ96HP8 235 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 CDK5RAP1Q96SZ6 601 aaKnown RBP14.13□□□□□ -0.15
CAPN1-207ENST00000527189 KLF16Q9BXK1 252 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-207ENST00000527189 PARD6AQ9NPB6 346 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 SPHK2Q9NRA0 654 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 SEMA4GQ9NTN9 838 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 CLIC5Q9NZA1 410 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 ARMCX3Q9UH62 379 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-207ENST00000527189 RALYQ9UKM9 306 aaKnown RBP14.13□□□□□ -0.15
CAPN1-207ENST00000527189 USP3Q9Y6I4 520 aa14.13□□□□□ -0.15
CAPN1-207ENST00000527189 ATG2BQ96BY7 2078 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 PMM2O15305 246 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 HOXC13P31276 330 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 PLA2G4AP47712 749 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 PXNP49023 591 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-207ENST00000527189 DGKEP52429 567 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 RAD23BP54727 409 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 SLC8A3P57103 927 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 ST3GAL2Q16842 350 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 TCERG1LQ5VWI1 586 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 ARHGAP17Q68EM7 881 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 C11orf74Q86VG3 221 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 CEP63Q96MT8 703 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 RTKNQ9BST9 563 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPN1-207ENST00000527189 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 LSM7Q9UK45 103 aaKnown RBP14.12□□□□□ -0.15
CAPN1-207ENST00000527189 MMP17Q9ULZ9 603 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 PCDHGA5Q9Y5G8 931 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 CEP295Q9C0D2 2601 aa14.12□□□□□ -0.15
CAPN1-207ENST00000527189 MYH10P35580 1976 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 GREM1O60565 184 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 TBX18O95935 607 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 RALAP11233 206 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 RARGP13631 454 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 SLC6A11P48066 632 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 PGFP49763 221 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 PMS1P54277 932 aaKnown RBP14.11□□□□□ -0.15
CAPN1-207ENST00000527189 YWHAEP62258 255 aaKnown RBP14.11□□□□□ -0.15
CAPN1-207ENST00000527189 CRY1Q16526 586 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 CBWD6Q4V339 395 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 ZNF394Q53GI3 561 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 C2orf27AQ580R0 203 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 DCAF17Q5H9S7 520 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-207ENST00000527189 CBWD3Q5JTY5 395 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 CBWD5Q5RIA9 395 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 GPRIN1Q7Z2K8 1008 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 RASSF3Q86WH2 238 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 BBS7Q8IWZ6 715 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 ETFBKMTQ8IXQ9 262 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 ARHGAP18Q8N392 663 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 ANKRD52Q8NB46 1076 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 SLC4A11Q8NBS3 891 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 TSTD1Q8NFU3 115 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 NETO1Q8TDF5 533 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 TATDN2Q93075 761 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 HHIPQ96QV1 700 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 ARHGEF4Q9NR80 690 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 OSER1Q9NX31 292 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 WDR35Q9P2L0 1181 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 DEC1Q9P2X7 70 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 CDV3Q9UKY7 258 aaKnown RBP14.11□□□□□ -0.15
CAPN1-207ENST00000527189 KIAA1257Q9ULG3 409 aa14.11□□□□□ -0.15
CAPN1-207ENST00000527189 A0A1W2PQH9 124 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 CYP26A1O43174 497 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 ALDH1A2O94788 518 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 RHOBTB1O94844 696 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 EPN2O95208 641 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 ZNF806P0C7X5 589 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 TBXAS1P24557 533 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 KIR2DL1P43626 348 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 ATXN1P54253 815 aaKnown RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 COG7P83436 770 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 CUL2Q13617 745 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 USP39Q53GS9 565 aaKnown RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 RAB41Q5JT25 222 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 EOGTQ5NDL2 527 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 PRR23CQ6ZRP0 262 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 KBTBD6Q86V97 674 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 C12orf40Q86WS4 652 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 TMEM25Q86YD3 366 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 PHTF2Q8N3S3 785 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 IL17RCQ8NAC3 791 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 JAKMIP2Q96AA8 810 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 CNOT6LQ96LI5 555 aaKnown RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 XPO6Q96QU8 1125 aaKnown RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 NMUR1Q9HB89 426 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-207ENST00000527189 MARK1Q9P0L2 795 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 ZNF510Q9Y2H8 683 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 STARD13Q9Y3M8 1113 aa14.1□□□□□ -0.15
CAPN1-207ENST00000527189 TRIM49BA6NDI0 452 aa14.09□□□□□ -0.15
CAPN1-207ENST00000527189 TBC1D3BA6NDS4 549 aa14.09□□□□□ -0.15
CAPN1-207ENST00000527189 SCAMP3O14828 347 aaKnown RBP14.09□□□□□ -0.15
CAPN1-207ENST00000527189 P4HA2O15460 535 aa14.09□□□□□ -0.15
CAPN1-207ENST00000527189 TULP3O75386 442 aa14.09□□□□□ -0.15
CAPN1-207ENST00000527189 SEC13P55735 322 aa14.09□□□□□ -0.15
CAPN1-207ENST00000527189 CETN1Q12798 172 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms