RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 P2RY11Q96G91 374 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 FAM84AQ96KN4 292 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 CNDP2Q96KP4 475 aaKnown RBP14.4□□□□□ -0.1
SSRP1-203ENST00000526696 MSTO1Q9BUK6 570 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 ASB7Q9H672 318 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 DNM3Q9UQ16 869 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 STON1Q9Y6Q2 735 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 ICE1Q9Y2F5 2266 aa14.4□□□□□ -0.1
SSRP1-203ENST00000526696 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 GABRDO14764 452 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
SSRP1-203ENST00000526696 CACNG3O60359 315 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 LDOC1O95751 146 aaPredicted RBP14.39□□□□□ -0.11
SSRP1-203ENST00000526696 CISD3P0C7P0 127 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 BDNFP23560 247 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.112e-7■■■■□ 21.7
SSRP1-203ENST00000526696 FOSBP53539 338 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 SMTNP53814 917 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 NCKAP1LP55160 1127 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 WNT7BP56706 349 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 TAF10Q12962 218 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 SHBQ15464 509 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 NUDT18Q6ZVK8 323 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 DDX42Q86XP3 938 aaKnown RBP eCLIP14.39□□□□□ -0.11
SSRP1-203ENST00000526696 CACUL1Q86Y37 369 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 TMPRSS6Q8IU80 811 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 C4orf32Q8N8J7 132 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 SNX29Q8TEQ0 813 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 KCNN1Q92952 543 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 MYLPFQ96A32 169 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
SSRP1-203ENST00000526696 OSGEPQ9NPF4 335 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 CRTAC1Q9NQ79 661 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 TMEM30AQ9NV96 361 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.39□□□□□ -0.11
SSRP1-203ENST00000526696 PLXNA2O75051 1894 aa14.39□□□□□ -0.11
SSRP1-203ENST00000526696 NPHP3-ACAD11A0A0J9YXS1 232 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 A0A1B0GTQ1 180 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 TISP43B9A030 160 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 COCHO43405 550 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 CDC45O75419 566 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 CDK4P11802 303 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 GP1BBP13224 206 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 OXTRP30559 389 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 COPAP53621 1224 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 UCNP55089 124 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 PCBP4P57723 403 aaKnown RBP14.38□□□□□ -0.11
SSRP1-203ENST00000526696 PSMC1P62191 440 aaKnown RBP14.38□□□□□ -0.11
SSRP1-203ENST00000526696 NFKB2Q00653 900 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 MYL7Q01449 175 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 NFATC3Q12968 1075 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 FAM124AQ86V42 546 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 CXorf38Q8TB03 319 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 SCFD1Q8WVM8 642 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 ORAI3Q9BRQ5 295 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 NUP58Q9BVL2 599 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 ITPR2Q14571 2701 aa14.38□□□□□ -0.11
SSRP1-203ENST00000526696 ANKRD63C9JTQ0 380 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 NEDD8-MDP1E9PL57 170 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 GREM1O60565 184 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 PFKFB2O60825 505 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 TYRP14679 529 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 GLDCP23378 1020 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 LMO2P25791 158 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 POLR2BP30876 1174 aaKnown RBP14.37□□□□□ -0.11
SSRP1-203ENST00000526696 ACSL1P33121 698 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 PPP3CCP48454 512 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 CACNA2D1P54289 1103 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 NOP14P78316 857 aaKnown RBP14.37□□□□□ -0.11
SSRP1-203ENST00000526696 TEAD4Q15561 434 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 INAVAQ3KP66 663 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 BROXQ5VW32 411 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 VSTM1Q6UX27 236 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 CRELD2Q6UXH1 353 aaPredicted RBP14.37□□□□□ -0.11
SSRP1-203ENST00000526696 CACTIN-AS1Q8N1I8 211 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 TMEM86AQ8N2M4 240 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 DCBLD1Q8N8Z6 715 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 EXD3Q8N9H8 876 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 WASF1Q92558 559 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 SIPA1Q96FS4 1042 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 DUSP9Q99956 384 aaKnown RBP14.37□□□□□ -0.11
SSRP1-203ENST00000526696 MAGEC2Q9UBF1 373 aaPredicted RBP14.37□□□□□ -0.11
SSRP1-203ENST00000526696 PCDHB1Q9Y5F3 818 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 C2CD3Q4AC94 2353 aa14.37□□□□□ -0.11
SSRP1-203ENST00000526696 F8VP50 259 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 HUS1O60921 280 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 INSM1Q01101 510 aaPredicted RBP14.36□□□□□ -0.11
SSRP1-203ENST00000526696 ENPP2Q13822 863 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 STARD3Q14849 445 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 DHX40Q8IX18 779 aaKnown RBP14.36□□□□□ -0.11
SSRP1-203ENST00000526696 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 IGSF22Q8N9C0 903 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 SAP25Q8TEE9 199 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 RFFLQ8WZ73 363 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
SSRP1-203ENST00000526696 CEP295NLQ96MC4 621 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms