RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ZNF840PA6NDX5 716 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 ZNF197O14709 1029 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 ARHGAP6O43182 974 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 NRDCO43847 1150 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 ZDHHC11BP0C7U3 371 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 RARGP13631 454 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 SMAD4Q13485 552 aaKnown RBP14.37□□□□□ -0.11
CD44-224ENST00000526669 CBX2Q14781 532 aaPredicted RBP14.37□□□□□ -0.11
CD44-224ENST00000526669 SPA17Q15506 151 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 EFHC1Q5JVL4 640 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 BSPRYQ5W0U4 402 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 POTEHQ6S545 545 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 MON1AQ86VX9 555 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 DEFB106AQ8N104 65 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 SCML4Q8N228 414 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 EMC1Q8N766 993 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 MAB21L3Q8N8X9 362 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 LEMD2Q8NC56 503 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 ST13P5Q8NFI4 369 aaPredicted RBP14.37□□□□□ -0.11
CD44-224ENST00000526669 OVCA2Q8WZ82 227 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 IRGQQ8WZA9 623 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 GOLGA1Q92805 767 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 WDR35Q9P2L0 1181 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 TICRRQ7Z2Z1 1910 aa14.37□□□□□ -0.11
CD44-224ENST00000526669 COL6A3P12111 3177 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 A0A0U1RQJ8 604 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 ANKRD62A6NC57 917 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 TLR5O60602 858 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 DAB1O75553 588 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 LCA5LO95447 670 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 FGF19O95750 216 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 TBX18O95935 607 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 RALAP11233 206 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 NCAM1P13591 858 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 GBP2P32456 591 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 GSCP56915 257 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 PITX1P78337 314 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 EFEMP1Q12805 493 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 ARHGAP15Q53QZ3 475 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 C10orf120Q5SQS8 335 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 HECTD3Q5T447 861 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 TRNP1Q6NT89 227 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 RSRC2Q7L4I2 434 aaKnown RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 SLC26A9Q7LBE3 791 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 ARHGAP18Q8N392 663 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 ARL14EPQ8N8R7 260 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 C3orf20Q8ND61 904 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 ATRIPQ8WXE1 791 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 CTNNBL1Q8WYA6 563 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 SUSD6Q92537 303 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 KHSRPQ92945 711 aaKnown RBP eCLIP14.36□□□□□ -0.11
CD44-224ENST00000526669 TRIM11Q96F44 468 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 VCPIP1Q96JH7 1222 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 MCEEQ96PE7 176 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 SLC22A12Q96S37 553 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 MYADMQ96S97 322 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 CYP2S1Q96SQ9 504 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 SMG9Q9H0W8 520 aaKnown RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 AVENQ9NQS1 362 aaPredicted RBP14.36□□□□□ -0.11
CD44-224ENST00000526669 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.36□□□□□ -0.11
CD44-224ENST00000526669 RASAL2Q9UJF2 1139 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 COG5Q9UP83 839 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 NAALADL1Q9UQQ1 740 aa14.36□□□□□ -0.11
CD44-224ENST00000526669 SYNJ2BP-COX16A0A087WUM0 186 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 TCRBV5S1A1TA0A578 114 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 RCCD1A6NED2 376 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 CAPN9O14815 690 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 HSF2BPO75031 334 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 FYNP06241 537 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 TMEM253P0C7T8 217 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 MYBL1P10243 752 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 MBL2P11226 248 aaPredicted RBP14.35□□□□□ -0.11
CD44-224ENST00000526669 KRT3P12035 628 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 FLT3P36888 993 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 PSEN1P49768 467 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 RPL7AP62424 266 aaKnown RBP14.35□□□□□ -0.11
CD44-224ENST00000526669 YWHAZP63104 245 aaKnown RBP14.35□□□□□ -0.11
CD44-224ENST00000526669 GPC5P78333 572 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 DCAF6Q58WW2 860 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 SYPL2Q5VXT5 272 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 PLEKHA7Q6IQ23 1121 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 DCUN1D2Q6PH85 259 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 KIAA1328Q86T90 577 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 NPAS3Q8IXF0 933 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 TTC16Q8NEE8 873 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 ADAM32Q8TC27 787 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 BTBD6Q96KE9 485 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 ZSWIM3Q96MP5 696 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 NUP85Q9BW27 656 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 TRIM7Q9C029 511 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 RNF38Q9H0F5 515 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 POPDC2Q9HBU9 364 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 ABCC13Q9NSE7 274 aa14.35□□□□□ -0.11
CD44-224ENST00000526669 ASNSD1Q9NWL6 643 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms