RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SIK3Q9Y2K2 1263 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 MRPS17Q9Y2R5 130 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 KMT2EQ8IZD2 1858 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 SPECC1L-ADORA2AF8WAN1 911 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 MDM4O15151 490 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 DCNP07585 359 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 TARSP26639 723 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 BPIFB4P59827 614 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 MEA1Q16626 185 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 KLHDC10Q6PID8 442 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 BHLHA9Q7RTU4 235 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 TADA2BQ86TJ2 420 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 SLC47A2Q86VL8 602 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 SCML4Q8N228 414 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 WBP2Q969T9 261 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 MSANTD3Q96H12 275 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 CBX8Q9HC52 389 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 FAM207AQ9NSI2 230 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 SH3BP1Q9Y3L3 701 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 HCN4Q9Y3Q4 1203 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
SSSCA1-202ENST00000526433 E2F8A0AVK6 867 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 YJEFN3A6XGL0 299 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 E7ENQ6 273 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 SLC9A3R1O14745 358 aaPredicted RBP17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 IRF1P10914 325 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 CTHP32929 405 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 RPL34P49207 117 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 DAOAP59103 153 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 NFKBIBQ15653 356 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 BTBD8Q5XKL5 378 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 CPA6Q8N4T0 437 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 WDTC1Q8N5D0 677 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 ATP2A3Q93084 1043 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 CDK5RAP1Q96SZ6 601 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 SLC4A5Q9BY07 1137 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 ST7Q9NRC1 585 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 CYTH4Q9UIA0 394 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 PCDHGC3Q9UN70 934 aa17.02■□□□□ 0.32
SSSCA1-202ENST00000526433 EPHB6O15197 1021 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 NCAM2O15394 837 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 TEX33O43247 280 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 FBXO21O94952 628 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 KRT9P35527 623 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 ACADSBP45954 432 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 NUBP1P53384 320 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 EFEMP1Q12805 493 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 NR1H3Q13133 447 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 FZD5Q13467 585 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 TXNDC11Q6PKC3 985 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 SCUBE3Q8IX30 993 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 ZNF687Q8N1G0 1237 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 DTWD2Q8NBA8 298 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 NEK11Q8NG66 645 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 IRGQQ8WZA9 623 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 MIS12Q9H081 205 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 LHX5Q9H2C1 402 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 DLGAP2Q9P1A6 1054 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
SSSCA1-202ENST00000526433 F8VZ95 297 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 NFATC1O95644 943 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 CAVIN2O95810 425 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 CYP11B1P15538 503 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 GJA4P35212 333 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 AMPD2Q01433 879 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 GOLGA8FQ08AF8 430 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 GOLGA8DPQ0D2H9 430 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 PON2Q15165 354 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 FILIP1LQ4L180 1135 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 HTR3DQ70Z44 454 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 TMEM110Q86TL2 294 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 LUZP1Q86V48 1076 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 MIB1Q86YT6 1006 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 PASD1Q8IV76 773 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 CLEC4CQ8WTT0 213 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 EDEM1Q92611 657 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 CLDN23Q96B33 292 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 PRRX2Q99811 253 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 KCNH6Q9H252 994 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 ABCC13Q9NSE7 274 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 RASAL2Q9UJF2 1139 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 DAAM1Q9Y4D1 1078 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 MUC6Q6W4X9 2439 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms