RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 NAA35Q5VZE5 725 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 HFE2Q6ZVN8 426 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 TADA2BQ86TJ2 420 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 DEPDC1BQ8WUY9 529 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 CPA5Q8WXQ8 436 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMPD1-202ENST00000526280 CDK5RAP1Q96SZ6 601 aaKnown RBP13.56□□□□□ -0.24
SMPD1-202ENST00000526280 HAUS4Q9H6D7 363 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 NUDT5Q9UKK9 219 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 LTFP02788 710 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 MBL2P11226 248 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 UNGP13051 313 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 GABRB2P47870 512 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 ZNF75DP51815 510 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 KLHL30Q0D2K2 578 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 FCHO2Q0JRZ9 810 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 ZNF571Q7Z3V5 609 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 ERICH1Q86X53 443 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 UBALD2Q8IYN6 164 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 OLIG1Q8TAK6 271 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 SH3RF2Q8TEC5 729 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 C18orf8Q96DM3 657 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 ZFRQ96KR1 1074 aaKnown RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 TRMT61BQ9BVS5 477 aaKnown RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 NACA2Q9H009 215 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 SYNCQ9H7C4 482 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 ABCC13Q9NSE7 274 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 DNMT3LQ9UJW3 386 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 CPQQ9Y646 472 aa13.55□□□□□ -0.24
SMPD1-202ENST00000526280 BZW2Q9Y6E2 419 aaKnown RBP13.55□□□□□ -0.24
SMPD1-202ENST00000526280 TRIOO75962 3097 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 LEFTY2O00292 366 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 DCXO43602 365 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 NARSO43776 548 aaKnown RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 FYNP06241 537 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 SRFP11831 508 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 SKILP12757 684 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 MMP8P22894 467 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 HNRNPH3P31942 346 aaKnown RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 GPC5P78333 572 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 ZXDAP98168 799 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 USP4Q13107 963 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 GRM2Q14416 872 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 ARID5BQ14865 1188 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 ZNF77Q15935 545 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 CLEC16AQ2KHT3 1053 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 EFHC1Q5JVL4 640 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 HGSNATQ68CP4 663 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 FAM183BPQ6ZVS7 135 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 BEND5Q7L4P6 421 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 DDX42Q86XP3 938 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 ZDHHC17Q8IUH5 632 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 KIAA1958Q8N8K9 716 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 MSANTD4Q8NCY6 345 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 SLC30A5Q8TAD4 765 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 IPO4Q8TEX9 1081 aaKnown RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 EDEM1Q92611 657 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 DNAJC7Q99615 494 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 KLF16Q9BXK1 252 aaPredicted RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 SLC2A4RGQ9NR83 387 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 GKN1Q9NS71 199 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 SMPD4Q9NXE4 827 aa13.54□□□□□ -0.24
SMPD1-202ENST00000526280 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
SMPD1-202ENST00000526280 FAM170AA1A519 330 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 PI4K2BG5E9Z4 385 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 ZNF263O14978 683 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 MDM4O15151 490 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 CHADO15335 359 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 SERPING1P05155 500 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 GLI1P08151 1106 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 TPM1P09493 284 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 ALADP13716 330 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 GDI1P31150 447 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 YWHAZP63104 245 aaKnown RBP13.53□□□□□ -0.24
SMPD1-202ENST00000526280 SLC6A3Q01959 620 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 CENPCQ03188 943 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 EFEMP1Q12805 493 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 TAF5Q15542 800 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 ARHGAP29Q52LW3 1261 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 OR6B2Q6IFH4 312 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 OLFML1Q6UWY5 402 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 TOGARAM2Q6ZUX3 1019 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 RSRC2Q7L4I2 434 aaKnown RBP13.53□□□□□ -0.24
SMPD1-202ENST00000526280 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
SMPD1-202ENST00000526280 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
SMPD1-202ENST00000526280 YAF2Q8IY57 180 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms