RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TSSK4Q6SA08 328 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 UBA3Q8TBC4 463 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 GPT2Q8TD30 523 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 KCTD13Q8WZ19 329 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 TFAP2BQ92481 460 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 NELL1Q92832 810 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 KREMEN1Q96MU8 473 aa18.41■□□□□ 0.54
NR1H3-228ENST00000525441 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.41■□□□□ 0.54
NR1H3-228ENST00000525441 M0QYV0 167 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 RNF225M0QZC1 329 aaPredicted RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 TULP2O00295 520 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 MBD3O95983 291 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 LMNAP02545 664 aaKnown RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 ADH5P11766 374 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 PRKCSHP14314 528 aaPredicted RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 BRD2P25440 801 aaKnown RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 YWHAGP61981 247 aaKnown RBP eCLIP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 GAD2Q05329 585 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 PKDCCQ504Y2 493 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 PM20D1Q6GTS8 502 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 RHBDF2Q6PJF5 856 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 HTR3DQ70Z44 454 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 RSRC2Q7L4I2 434 aaKnown RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 BBS7Q8IWZ6 715 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 ZBTB44Q8NCP5 570 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 ULBP1Q9BZM6 244 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 FBRSL1Q9HCM7 1045 aaKnown RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 STRIP2Q9ULQ0 834 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 CNTN6Q9UQ52 1028 aa18.4■□□□□ 0.54
NR1H3-228ENST00000525441 RIF1Q5UIP0 2472 aaKnown RBP18.4■□□□□ 0.54
NR1H3-228ENST00000525441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.39■□□□□ 0.53
NR1H3-228ENST00000525441 RNF40O75150 1001 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 TDGF1P13385 188 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 OPRD1P41143 372 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 EIF2DP41214 584 aaKnown RBP18.39■□□□□ 0.53
NR1H3-228ENST00000525441 COG7P83436 770 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 ADIGQ0VDE8 80 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 LY6G5CQ5SRR4 150 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 BTBD8Q5XKL5 378 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 NAIF1Q69YI7 327 aaPredicted RBP18.39■□□□□ 0.53
NR1H3-228ENST00000525441 SMYD5Q6GMV2 418 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
NR1H3-228ENST00000525441 ASCL5Q7RTU5 278 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 MIB1Q86YT6 1006 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 CNGB3Q9NQW8 809 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 APEX2Q9UBZ4 518 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 RASAL2Q9UJF2 1139 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 NUDT5Q9UKK9 219 aa18.39■□□□□ 0.53
NR1H3-228ENST00000525441 PTPRZ1P23471 2315 aaPredicted RBP18.38■□□□□ 0.53
NR1H3-228ENST00000525441 CHURC1-FNTBB4DL54 471 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 MDM4O15151 490 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 MED7O43513 233 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SLC9A1P19634 815 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 EFEMP1Q12805 493 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 GAB4Q2WGN9 574 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 PREPLQ4J6C6 727 aaPredicted RBP18.38■□□□□ 0.53
NR1H3-228ENST00000525441 VWA3BQ502W6 1294 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SASS6Q6UVJ0 657 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SCML4Q8N228 414 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SLC35F5Q8WV83 523 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SECISBP2LQ93073 1101 aaKnown RBP18.38■□□□□ 0.53
NR1H3-228ENST00000525441 ACDQ96AP0 544 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 HSFY1Q96LI6 401 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 PNKPQ96T60 521 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 TUBGCP2Q9BSJ2 902 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SPHK2Q9NRA0 654 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 OLA1Q9NTK5 396 aaKnown RBP18.38■□□□□ 0.53
NR1H3-228ENST00000525441 SLC8A2Q9UPR5 921 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 ZNF510Q9Y2H8 683 aa18.38■□□□□ 0.53
NR1H3-228ENST00000525441 FAM186AA6NE01 2351 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 KCNJ18B7U540 433 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 HOXC11O43248 304 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-228ENST00000525441 LILRB5O75023 590 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 APODP05090 189 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 LCP1P13796 627 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 PON1P27169 355 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 HOXA6P31267 233 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 ENOX1Q8TC92 643 aaKnown RBP18.37■□□□□ 0.53
NR1H3-228ENST00000525441 RNF139Q8WU17 664 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 WBP2Q969T9 261 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 ZSWIM1Q9BR11 485 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 DCLK3Q9C098 648 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 MARCH2Q9P0N8 246 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 FANCMQ8IYD8 2048 aa18.37■□□□□ 0.53
NR1H3-228ENST00000525441 K7ESF4 209 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 PES1O00541 588 aaKnown RBP18.36■□□□□ 0.53
NR1H3-228ENST00000525441 GREM1O60565 184 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 STC2O76061 302 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 FBXO21O94952 628 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 EEF1GP26641 437 aaKnown RBP18.36■□□□□ 0.53
NR1H3-228ENST00000525441 USP8P40818 1118 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 RGS7P49802 495 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 MEA1Q16626 185 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 ARHGAP44Q17R89 818 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 ANO4Q32M45 955 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 HSP90AA4PQ58FG1 418 aa18.36■□□□□ 0.53
NR1H3-228ENST00000525441 PMF1Q6P1K2 205 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms