RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 EPB41L2O43491 1005 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 SH3BP5O60239 455 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 MGEA5O60502 916 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 BMP15O95972 392 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 ZBED1O96006 694 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 A1BGP04217 495 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 IGKV2-30P06310 120 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 PARP1P09874 1014 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 GOLGA6DP0CG33 693 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 TXNP10599 105 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 IL1R1P14778 569 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 PHKG2P15735 406 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 BTF3P20290 206 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 ATP5F1P24539 256 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 PEX2P28328 305 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 NTSR1P30989 418 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 ZNF268Q14587 947 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 KCNAB1Q14722 419 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 POLD3Q15054 466 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 GFOD2Q3B7J2 385 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 Q4G0T1 1027 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 PXDC1Q5TGL8 231 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 DENND2CQ68D51 928 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 TMEM65Q6PI78 240 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 ZNF813Q6ZN06 617 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 GET4Q7L5D6 327 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 CHST15Q7LFX5 561 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 SRGAP1Q7Z6B7 1085 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 C14orf80Q86SX3 495 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 YAF2Q8IY57 180 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 METTL25Q8N6Q8 603 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 MAFAQ8NHW3 353 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 OSR1Q8TAX0 266 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 SMCR8Q8TEV9 937 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 TSR2Q969E8 191 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 WDYHV1Q96HA8 205 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 DHX36Q9H2U1 1008 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 TRNAU1APQ9NX07 287 aaKnown RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 GOLGA6AQ9NYA3 693 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 NKX1-2Q9UD57 310 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 PRDM4Q9UKN5 801 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 ASAP1Q9ULH1 1129 aa2.83□□□□□ -1.96
CD44-216ENST00000525293 FRMPD2Q68DX3 1309 aaPredicted RBP2.83□□□□□ -1.96
CD44-216ENST00000525293 CCDC194A0A1B0GVG4 234 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 AQP7P3A6NL99 342 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 CLIC1O00299 241 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 ADAM10O14672 748 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 TMPRSS11DO60235 418 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 HRGP04196 525 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 CD19P15391 556 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 ATF7P17544 494 aaPredicted RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 SCP2P22307 547 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 YY1P25490 414 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 MCM5P33992 734 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 CARSP49589 748 aaKnown RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 GHRHRQ02643 423 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 DEUP1Q05D60 604 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 LARS2Q15031 903 aaKnown RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 C4orf46Q504U0 113 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 MEX3CQ5U5Q3 659 aaKnown RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 PLAG1Q6DJT9 500 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 CLEC9AQ6UXN8 241 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 RANBP10Q6VN20 620 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 DCDC5Q6ZRR9 648 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 CREBRFQ8IUR6 639 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 LINC01465Q8N7H1 131 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 NANOGP1Q8N7R0 232 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 PNISRQ8TF01 805 aaKnown RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 IPCEF1Q8WWN9 437 aaPredicted RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 MAP4K1Q92918 833 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 ZC3H10Q96K80 434 aaKnown RBP2.82□□□□□ -1.96
CD44-216ENST00000525293 HS6ST2Q96MM7 605 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 HIST1H2AAQ96QV6 131 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 APOL5Q9BWW9 433 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 UBA5Q9GZZ9 404 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 MAF1Q9H063 256 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 FAM83DQ9H4H8 585 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 TRIM36Q9NQ86 728 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 TBC1D23Q9NUY8 699 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 OBP2AQ9NY56 170 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 DKK4Q9UBT3 224 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 RIMKLBQ9ULI2 386 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 PCDHGB6Q9Y5F9 930 aa2.82□□□□□ -1.96
CD44-216ENST00000525293 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.81□□□□□ -1.96
CD44-216ENST00000525293 F8W8V4 182 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 H3BNC9 293 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 DHX16O60231 1041 aaKnown RBP2.81□□□□□ -1.96
CD44-216ENST00000525293 ZNF500O60304 480 aaPredicted RBP2.81□□□□□ -1.96
CD44-216ENST00000525293 SNX2O60749 519 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 RNF8O76064 485 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 INMTO95050 263 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 MT-ND5P03915 603 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 BDNFP23560 247 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 HOXD9P28356 352 aaPredicted RBP2.81□□□□□ -1.96
CD44-216ENST00000525293 NR4A2P43354 598 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 PLCD1P51178 756 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 CFHR3Q02985 330 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 GBX1Q14549 363 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 KCNB1Q14721 858 aa2.81□□□□□ -1.96
CD44-216ENST00000525293 MFSD13AQ14CX5 517 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms