RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RHOBTB2Q9BYZ6 727 aa14.08□□□□□ -0.16
LRRK1-202ENST00000525284 NR1D2Q14995 579 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ABRAXAS1Q6UWZ7 409 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ARHGEF19Q8IW93 802 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 C3orf20Q8ND61 904 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 MAGEB18Q96M61 343 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ACOX2Q99424 681 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 C1orf50Q9BV19 199 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 C12orf4Q9NQ89 552 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 SEC31BQ9NQW1 1179 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 CHP2O43745 196 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 FKBP6O75344 327 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 SLC2A4P14672 509 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 MYBPC2Q14324 1141 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 PALB2Q86YC2 1186 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 PHACTR4Q8IZ21 702 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 TRPV3Q8NET8 790 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 BDH2Q9BUT1 245 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 GSDMCQ9BYG8 508 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 SEMA6AQ9H2E6 1030 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 EPB41L1Q9H4G0 881 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 EURLQ9NYK6 297 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 POLRMTO00411 1230 aaKnown RBP14.07□□□□□ -0.16
LRRK1-202ENST00000525284 COMTP21964 271 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ACOT2P49753 483 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 SLC18A3Q16572 532 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 PRMT9Q6P2P2 845 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 RNF149Q8NC42 400 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 GRIP2Q9C0E4 1043 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 CD209Q9NNX6 404 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 GSTK1Q9Y2Q3 226 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 WDR19Q8NEZ3 1342 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 RARBP10826 455 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 EFR3AQ14156 821 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ZNF846Q147U1 533 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 MGAT5BQ3V5L5 792 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 MYO1HQ8N1T3 1032 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 SAMD3Q8N6K7 520 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
LRRK1-202ENST00000525284 RNF145Q96MT1 663 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ELOVL6Q9H5J4 265 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 STN1Q9H668 368 aaKnown RBP14.07□□□□□ -0.16
LRRK1-202ENST00000525284 A0A0X1KG70 313 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 C2orf81A6NN90 581 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 NMT1P30419 496 aaKnown RBP14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ARL3P36405 182 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 ACAP1Q15027 740 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 SWI5Q1ZZU3 235 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 MTSS1LQ765P7 747 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 HAUS6Q7Z4H7 955 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 PSMA8Q8TAA3 256 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 DCAF4Q8WV16 495 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 WDR41Q9HAD4 459 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 WDR35Q9P2L0 1181 aa14.07□□□□□ -0.16
LRRK1-202ENST00000525284 CLUP10909 449 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 RAG1P15918 1043 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 UBA3Q8TBC4 463 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 TFB1MQ8WVM0 346 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 UNKQ9C0B0 810 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 SFNP31947 248 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 HSD17B3P37058 310 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 SNX17Q15036 470 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 NSUN6Q8TEA1 469 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 EIF2AK1Q9BQI3 630 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CCDC59Q9P031 241 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 APEX2Q9UBZ4 518 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ITGB1BP2Q9UKP3 347 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 PDS5AQ29RF7 1337 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 TRAPPC3O43617 180 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 RBP3P10745 1247 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 RFC5P40937 340 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 GSTM5P46439 218 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ZMYM3Q14202 1370 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 SETD9Q8NE22 299 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ZSCAN18Q8TBC5 510 aaPredicted RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 NSMCE2Q96MF7 247 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ERP44Q9BS26 406 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CNPY3Q9BT09 278 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 RPS6KL1Q9Y6S9 549 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 A0A1W2PQC6 194 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 MGRN1O60291 552 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ZNF432O94892 652 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 STAU1O95793 577 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 PRKCBP05771 671 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ZNF37AP17032 561 aaPredicted RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 SMCO1Q147U7 214 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 SMYD1Q8NB12 490 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 RSAD1Q9HA92 442 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CHORDC1Q9UHD1 332 aaPredicted RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 VPS9D1Q9Y2B5 631 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CEP170Q5SW79 1584 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CIAO1O76071 339 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 UPP2O95045 317 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms