RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 RPL10AP62906 217 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ROR1Q01973 937 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 DHX9Q08211 1270 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ADCY1Q08828 1119 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 IFFO1Q0D2I5 559 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 FAAP100Q0VG06 881 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 MTA1Q13330 715 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 DPYSL2Q16555 572 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 TRIM60Q495X7 471 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 FAM171A1Q5VUB5 890 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 BTBD8Q5XKL5 378 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 DENND2CQ68D51 928 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 DARS2Q6PI48 645 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 PPP1R21Q6ZMI0 780 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 PAQR9Q6ZVX9 377 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 TRMT10CQ7L0Y3 403 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 HOOK3Q86VS8 718 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ZNF280BQ86YH2 543 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 TMEM199Q8N511 208 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ALLCQ8N6M5 410 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 RNF139Q8WU17 664 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 UBLCP1Q8WVY7 318 aaPredicted RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ART4Q93070 314 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 NTAN1Q96AB6 310 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 PGAP3Q96FM1 320 aaPredicted RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 C8orf48Q96LL4 319 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 CASD1Q96PB1 797 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 NPY6RQ99463 290 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 HINFPQ9BQA5 517 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 LPIN3Q9BQK8 851 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 SNRNP25Q9BV90 132 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 STMN4Q9H169 189 aaPredicted RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 DHX35Q9H5Z1 703 aaKnown RBP10.39□□□□□ -0.75
VPS13B-212ENST00000524330 NRDE2Q9H7Z3 1164 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 FAM204AQ9H8W3 233 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 PCDH18Q9HCL0 1135 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 ABCC13Q9NSE7 274 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 AP4E1Q9UPM8 1137 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 RAD54BQ9Y620 910 aa10.39□□□□□ -0.75
VPS13B-212ENST00000524330 C3orf70A6NLC5 250 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 A6NNZ2 444 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 HACD1B0YJ81 288 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 PPFIA2O75334 1257 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 SASH3O75995 380 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 NCAM1P13591 858 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 RARGP13631 454 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 CPB1P15086 417 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 TCF4P15884 667 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 OAS2P29728 719 aaKnown RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 HTR7P34969 479 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 RPL21P46778 160 aaKnown RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 PSEN1P49768 467 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 PMS2P54278 862 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 HDAC4P56524 1084 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DYNLT1P63172 113 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 OTUD4Q01804 1114 aaKnown RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 XRCC4Q13426 336 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DPYSL3Q14195 570 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 LLGL1Q15334 1064 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 TUBB8Q3ZCM7 444 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 SLC39A12Q504Y0 691 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 ANKRD20A8PQ5CZ79 823 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 PPP6R3Q5H9R7 873 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 SPOUT1Q5T280 376 aaKnown RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 KIAA0319Q5VV43 1072 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 PM20D1Q6GTS8 502 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 FUT10Q6P4F1 479 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 CD300LGQ6UXG3 332 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DEFB128Q7Z7B8 93 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DDX42Q86XP3 938 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 CEP57Q86XR8 500 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 ARFGAP1Q8N6T3 406 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 SLC35B2Q8TB61 432 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 SLC7A14Q8TBB6 771 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 ACTL9Q8TC94 416 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 ATG4AQ8WYN0 398 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■□□ 16.2
VPS13B-212ENST00000524330 RNF34Q969K3 372 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 GDAP1L1Q96MZ0 367 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 CCDC77Q9BR77 488 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 C11orf84Q9BUA3 381 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 FRMD8Q9BZ67 464 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 AAASQ9NRG9 546 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DONSONQ9NYP3 566 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 CACNG4Q9UBN1 327 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DNPEPQ9ULA0 475 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
VPS13B-212ENST00000524330 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
VPS13B-212ENST00000524330 DNALI1O14645 258 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-212ENST00000524330 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 MYZAPP0CAP1 466 aa10.37□□□□□ -0.75
VPS13B-212ENST00000524330 RBP3P10745 1247 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms