RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 SMARCE1Q969G3 411 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 CYFIP2Q96F07 1278 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 ZC3H10Q96K80 434 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 GSDMAQ96QA5 445 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 XPO6Q96QU8 1125 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 ARRDC1-AS1Q9H2J1 176 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 APOBEC3GQ9HC16 384 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 WDR35Q9P2L0 1181 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 DEC1Q9P2X7 70 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 NAGPAQ9UK23 515 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 USP24Q9UPU5 2620 aa9.35□□□□□ -0.91
CTNNA1-240ENST00000523912 OBSL1O75147 1896 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 K7EQS6 105 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 PSMA7O14818 248 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 KLF8O95600 359 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 PPP1R2P41236 205 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 FKBP3Q00688 224 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 CREB5Q02930 508 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 LRRC63Q05C16 580 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 CETN1Q12798 172 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 PNOCQ13519 176 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 CRY1Q16526 586 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 GAB4Q2WGN9 574 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 PLA2G2CQ5R387 149 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 C10orf76Q5T2E6 689 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 ZNF658Q5TYW1 1059 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 GRAMD4Q6IC98 578 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 RSRC2Q7L4I2 434 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 BBS7Q8IWZ6 715 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 SMYD4Q8IYR2 804 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 CCDC33Q8N5R6 958 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 ALLCQ8N6M5 410 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 TXNDC5Q8NBS9 432 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 EZH1Q92800 747 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 ZFRQ96KR1 1074 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 HEXIM2Q96MH2 286 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 TWNKQ96RR1 684 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 DUSP16Q9BY84 665 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 SPHK2Q9NRA0 654 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 CISHQ9NSE2 258 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 DNAJC17Q9NVM6 304 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 RAB20Q9NX57 234 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 STRIP2Q9ULQ0 834 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 ZNF510Q9Y2H8 683 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 PTPRDP23468 1912 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 FAM208BQ5VWN6 2430 aa9.34□□□□□ -0.91
CTNNA1-240ENST00000523912 CACNA1GO43497 2377 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 A0A1W2PQH9 124 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 NEDD8-MDP1E9PL57 170 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 MAP3K13O43283 966 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 GDF9O60383 454 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 TULP3O75386 442 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 BEST1O76090 585 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 RARGP13631 454 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 KCNA4P22459 653 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 TBXAS1P24557 533 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 TIE1P35590 1138 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 DPP6P42658 865 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 PLA2G4AP47712 749 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 SLC6A11P48066 632 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 E2F5Q15329 346 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 ZNF394Q53GI3 561 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 SDE2Q6IQ49 451 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 HTR3DQ70Z44 454 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 LPCAT2Q7L5N7 544 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 GPRIN1Q7Z2K8 1008 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 CCDC186Q7Z3E2 898 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 RASSF3Q86WH2 238 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 C12orf40Q86WS4 652 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 ETFBKMTQ8IXQ9 262 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 PGBD3Q8N328 593 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 ZNF513Q8N8E2 541 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 TERB1Q8NA31 727 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 MDGA1Q8NFP4 955 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 TMEM176AQ96HP8 235 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 BBS2Q9BXC9 721 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 KLF16Q9BXK1 252 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 TPSD1Q9BZJ3 242 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 DUSP15Q9H1R2 295 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 METTL14Q9HCE5 456 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 POLR3BQ9NW08 1133 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 CLIC5Q9NZA1 410 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 HESX1Q9UBX0 185 aa9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 ARMCX3Q9UH62 379 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-240ENST00000523912 A0A0A0MRY4 1105 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 TCRBV21S2A2A0A5A6 115 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms