RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 KCNAB2Q13303 367 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 E2F5Q15329 346 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 FNDC3BQ53EP0 1204 aaKnown RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 TRIM61Q5EBN2 209 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 CCDC158Q5M9N0 1113 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 HLA-DQA1Q5Y7H0 255 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 FAM180BQ6P0A1 224 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 CLEC18BQ6UXF7 455 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 MAMDC2Q7Z304 686 aaPredicted RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 STRA8Q7Z7C7 330 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 C11orf74Q86VG3 221 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 SLC39A11Q8N1S5 342 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 ARL6IP6Q8N6S5 226 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 NAT16Q8N8M0 369 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 ANKS4BQ8N8V4 417 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 CLEC18CQ8NCF0 446 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 CMASQ8NFW8 434 aaPredicted RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 PPTC7Q8NI37 304 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 SDR42E1Q8WUS8 393 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 DCAF4Q8WV16 495 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 ADAMTS14Q8WXS8 1223 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 GLG1Q92896 1179 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 TBC1D31Q96DN5 1066 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 ZC3H10Q96K80 434 aaKnown RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 ZNF830Q96NB3 372 aaPredicted RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 SPAG5Q96R06 1193 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 ZFYVE21Q9BQ24 234 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 NCOA5Q9HCD5 579 aaKnown RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 DCP1AQ9NPI6 582 aaPredicted RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 FEM1BQ9UK73 627 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 NDRG2Q9UN36 371 aaKnown RBP5.65□□□□□ -1.5
PABPC1-223ENST00000523636 SMC3Q9UQE7 1217 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 TELO2Q9Y4R8 837 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 NPFFR2Q9Y5X5 522 aa5.65□□□□□ -1.5
PABPC1-223ENST00000523636 PCDH15Q96QU1 1955 aa5.65□□□□□ -1.51
PABPC1-223ENST00000523636 IGKV6D-41A0A0C4DH26 115 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 NPHP3-ACAD11A0A0J9YXS1 232 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 CCDC195A0A1B0GUA6 201 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 BCLAF3A2AJT9 711 aaKnown RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 CAPN8A6NHC0 703 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 K7ENM7 598 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 TOR1BO14657 336 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 TLX3O43711 291 aaPredicted RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 TMCC2O75069 709 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 TPM2P07951 284 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PLS3P13797 630 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 LAG3P18627 525 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PXNP49023 591 aaPredicted RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 ROR1Q01973 937 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 GALEQ14376 348 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 UAP1L1Q3KQV9 507 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PLK5Q496M5 336 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 ARTNQ5T4W7 220 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 XP32Q5T750 250 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 DENND5AQ6IQ26 1287 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 ZNF449Q6P9G9 518 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 ZNF852Q6ZMS4 543 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 Q6ZS52 159 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 CACNA2D4Q7Z3S7 1137 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 SPPL2CQ8IUH8 684 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 TPH2Q8IWU9 490 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PPIL6Q8IXY8 311 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PDZD8Q8NEN9 1154 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PARD3BQ8TEW8 1205 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 ZFPM2Q8WW38 1151 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 GAB3Q8WWW8 586 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PTPRN2Q92932 1015 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 SH3KBP1Q96B97 665 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 CENPTQ96BT3 561 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 CASD1Q96PB1 797 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 MAP3K14Q99558 947 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PLA2G2FQ9BZM2 168 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 RWDD1Q9H446 243 aaPredicted RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 LMAN1LQ9HAT1 526 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 GPRC5CQ9NQ84 441 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 MCM9Q9NXL9 1143 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 SLAMF8Q9P0V8 285 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 ADD3Q9UEY8 706 aaKnown RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PRDM4Q9UKN5 801 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PADI3Q9ULW8 664 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 MAPRE3Q9UPY8 281 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 DMTF1Q9Y222 760 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 LUC7L2Q9Y383 392 aaKnown RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 MAGED1Q9Y5V3 778 aaPredicted RBP5.64□□□□□ -1.51
PABPC1-223ENST00000523636 VPS13CQ709C8 3753 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 VWA8A3KMH1 1905 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 PTPRDP23468 1912 aa5.64□□□□□ -1.51
PABPC1-223ENST00000523636 TEX51A0A1B0GUA7 166 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 FADS2P1A8MWK0 482 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 NT5C1B-RDH14C9J2C7 533 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 PMM2O15305 246 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 NCAM2O15394 837 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 CAVIN2O95810 425 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 STAG3L1P0CL83 205 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 SETSIPP0DME0 302 aa5.63□□□□□ -1.51
PABPC1-223ENST00000523636 MYBP10242 640 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms