RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 RFWD2Q8NHY2 731 aa16.98■□□□□ 0.31
SMG1P3-206ENST00000522841 FAM172AQ8WUF8 416 aa16.98■□□□□ 0.31
SMG1P3-206ENST00000522841 CYTH2Q99418 400 aa16.98■□□□□ 0.31
SMG1P3-206ENST00000522841 TRIM56Q9BRZ2 755 aaKnown RBP16.98■□□□□ 0.31
SMG1P3-206ENST00000522841 PPCSQ9HAB8 311 aa16.98■□□□□ 0.31
SMG1P3-206ENST00000522841 TEX264Q9Y6I9 313 aa16.98■□□□□ 0.31
SMG1P3-206ENST00000522841 T-ENOLP0DO92 83 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 ATXN1P54253 815 aaKnown RBP16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 INCA1Q0VD86 236 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 LRRC6Q86X45 466 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 PCDH19Q8TAB3 1148 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 KHSRPQ92945 711 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 FASTKD5Q7L8L6 764 aaKnown RBP16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 C16orf70Q9BSU1 422 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 CYLDQ9NQC7 956 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 SNTG2Q9NY99 539 aa16.97■□□□□ 0.31
SMG1P3-206ENST00000522841 H3BRB1 525 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 LPXNO60711 386 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 PYGBP11216 843 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 ATP2A2P16615 1042 aaKnown RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 BCAR1P56945 870 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 ZNF200P98182 395 aaPredicted RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 TFDP2Q14188 446 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 CCDC110Q8TBZ0 833 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 C18orf25Q96B23 403 aaPredicted RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 FAM111AQ96PZ2 611 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 PCDH18Q9HCL0 1135 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 FETUBQ9UGM5 382 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 ITGA11Q9UKX5 1188 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 NR2E3Q9Y5X4 410 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 PLXNA1Q9UIW2 1896 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 SMNDC1O75940 238 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 ALADP13716 330 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 ALDH3A1P30838 453 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 TAF1BQ53T94 588 aaPredicted RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 OLFML1Q6UWY5 402 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 NLRP9Q7RTR0 991 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 MTDHQ86UE4 582 aaKnown RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 CTAGE3PQ8IX95 158 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 C7orf31Q8N865 590 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 SNRNP25Q9BV90 132 aaKnown RBP16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 PHACTR1Q9C0D0 580 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 MANSC1Q9H8J5 431 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 TXLNGQ9NUQ3 528 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 KANSL3Q9P2N6 904 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 IKBKGQ9Y6K9 419 aa16.96■□□□□ 0.31
SMG1P3-206ENST00000522841 MYO18AQ92614 2054 aaKnown RBP16.96■□□□□ 0.3
SMG1P3-206ENST00000522841 CXorf49A8MYA2 514 aaPredicted RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 INHBAP08476 426 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 GRIK4Q16099 956 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 PPM1NQ8N819 430 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 TTC17Q96AE7 1141 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 DPEP3Q9H4B8 488 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 SSU72Q9NP77 194 aaKnown RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 SETD4Q9NVD3 440 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 ZSWIM8A7E2V4 1837 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 F5H423 210 aaPredicted RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 PAPSS1O43252 624 aaPredicted RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 APRTP07741 180 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 YWHAZP63104 245 aaKnown RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 FAM47CQ5HY64 1035 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 PPTC7Q8NI37 304 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
SMG1P3-206ENST00000522841 A0A0G2JND7 137 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 ANKRD33BA6NCL7 494 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 APOL1O14791 398 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 UGT1A9O60656 530 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 ZBED1O96006 694 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 SDC4P31431 198 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 SKIV2L2P42285 1042 aaKnown RBP16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 MARCH8Q5T0T0 291 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 IFNLR1Q8IU57 520 aaPredicted RBP16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 MAP7D3Q8IWC1 876 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 UGT1A7Q9HAW7 530 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 UGT1A10Q9HAW8 530 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 UGT1A8Q9HAW9 530 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 CDHR5Q9HBB8 845 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 C2CD2Q9Y426 696 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 DCTN3O75935 186 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 PDGFRBP09619 1106 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 SLC6A3Q01959 620 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 ZNF792Q3KQV3 632 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 CDHR3Q6ZTQ4 885 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 CAND1Q86VP6 1230 aaKnown RBP16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 OR6B3Q8NGW1 331 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 SLC7A6OSQ96CW6 309 aaPredicted RBP16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 PLAC1Q9HBJ0 212 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 IQANK1A0A1B0GTG1 560 aa16.94■□□□□ 0.3
SMG1P3-206ENST00000522841 C2orf71A6NGG8 1288 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms