RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 NAIF1Q69YI7 327 aaPredicted RBP8.59□□□□□ -1.03
PVT1-213ENST00000522414 PKN3Q6P5Z2 889 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 PRR23BQ6ZRT6 265 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 MON1AQ86VX9 555 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 DTX1Q86Y01 620 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 CBWD2Q8IUF1 395 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 TRIM42Q8IWZ5 723 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 SPEM1Q8N4L4 309 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 LINC00301Q8NCQ3 95 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 C2orf15Q8WU43 125 aaKnown RBP8.59□□□□□ -1.03
PVT1-213ENST00000522414 CHFRQ96EP1 664 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 INTS4Q96HW7 963 aaKnown RBP8.59□□□□□ -1.03
PVT1-213ENST00000522414 GCNAQ96QF7 691 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 SLC22A12Q96S37 553 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 PKMYT1Q99640 499 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 ACBD6Q9BR61 282 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 FAM126AQ9BYI3 521 aaPredicted RBP8.59□□□□□ -1.03
PVT1-213ENST00000522414 BACH2Q9BYV9 841 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 MTMR12Q9C0I1 747 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 EBF3Q9H4W6 596 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 C7orf69Q9H7B7 122 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 HPS4Q9NQG7 708 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 OLFML3Q9NRN5 406 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 INTS13Q9NVM9 706 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 THG1LQ9NWX6 298 aaKnown RBP8.59□□□□□ -1.03
PVT1-213ENST00000522414 KCNK4Q9NYG8 393 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 DLL3Q9NYJ7 618 aa8.59□□□□□ -1.03
PVT1-213ENST00000522414 NUP210Q8TEM1 1887 aaPredicted RBP8.59□□□□□ -1.03
PVT1-213ENST00000522414 DENND4CQ5VZ89 1909 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 EPG5Q9HCE0 2579 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 ZNF233A6NK53 670 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 GABRDO14764 452 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 SPTLC2O15270 562 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 WEE1P30291 646 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 AVPR1AP37288 418 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 PNPLA4P41247 253 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 NASPP49321 788 aaPredicted RBP8.58□□□□□ -1.04
PVT1-213ENST00000522414 GALK1P51570 392 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 SMARCB1Q12824 385 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 DPYDQ12882 1025 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 RUNX3Q13761 415 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 LRRC32Q14392 662 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 PPP2R5DQ14738 602 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 NFE2Q16621 373 aaPredicted RBP8.58□□□□□ -1.04
PVT1-213ENST00000522414 DUOXA2Q1HG44 320 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 ITPRIPL2Q3MIP1 535 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 CRTC2Q53ET0 693 aaPredicted RBP8.58□□□□□ -1.04
PVT1-213ENST00000522414 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 SHC4Q6S5L8 630 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 SCN4BQ8IWT1 228 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 CCDC65Q8IXS2 484 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 GPD1LQ8N335 351 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 LRRC52Q8N7C0 313 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 HPDLQ96IR7 371 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 ZNF560Q96MR9 790 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 LINC00597Q9H2U6 94 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 ZSCAN16Q9H4T2 348 aaPredicted RBP8.58□□□□□ -1.04
PVT1-213ENST00000522414 TMEM206Q9H813 350 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 TRPC7Q9HCX4 862 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 TDP1Q9NUW8 608 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 GDAP2Q9NXN4 497 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 OBP2AQ9NY56 170 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 ITGA11Q9UKX5 1188 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 USP18Q9UMW8 372 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 LAMA1P25391 3075 aa8.58□□□□□ -1.04
PVT1-213ENST00000522414 CNOT1A5YKK6 2376 aaKnown RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 HMX2A2RU54 273 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 CLIC2O15247 247 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 TGFB1I1O43294 461 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 NOL4O94818 638 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 EGFP01133 1207 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 GHRHP01286 108 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 LHX1P48742 406 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 PSMC1P62191 440 aaKnown RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 RPL10AP62906 217 aaKnown RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 MYL7Q01449 175 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 C11orf91Q3C1V1 193 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 FSTL4Q6MZW2 842 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 FAM171BQ6P995 826 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 SPATA2LQ8IUW3 424 aaPredicted RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 ADGRF2Q8IZF7 708 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 TMEM86AQ8N2M4 240 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 TOP6BLQ8N6T0 577 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 ZNF507Q8TCN5 953 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 KBTBD7Q8WVZ9 684 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 MRPS31Q92665 395 aaKnown RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 SECISBP2LQ93073 1101 aaKnown RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 ELMO3Q96BJ8 720 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 CCDC127Q96BQ5 260 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 DHX58Q96C10 678 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 KRTAP4-9Q9BYQ8 210 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 TRIM9Q9C026 710 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 BLZF1Q9H2G9 400 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 CRTAC1Q9NQ79 661 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 KBTBD4Q9NVX7 518 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 HSPBP1Q9NZL4 362 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 ADGRE2Q9UHX3 823 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 RAB23Q9ULC3 237 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 NME7Q9Y5B8 376 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 KCNMB2Q9Y691 235 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms