RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CAPN9O14815 690 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 MDM4O15151 490 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 GABRB2P47870 512 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 DAOAP59103 153 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 MESDQ14696 234 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 VEPH1Q14D04 833 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 DUSP6Q16828 381 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 C15orf59Q2T9L4 293 aaPredicted RBP12.96□□□□□ -0.34
PABPC1-219ENST00000522387 CEP112Q8N8E3 955 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 STK32AQ8WU08 396 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 KCTD13Q8WZ19 329 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.34
PABPC1-219ENST00000522387 ZNF334Q9HCZ1 680 aaPredicted RBP12.96□□□□□ -0.34
PABPC1-219ENST00000522387 USTQ9Y2C2 406 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 MTCH2Q9Y6C9 303 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 CAPN6Q9Y6Q1 641 aa12.96□□□□□ -0.34
PABPC1-219ENST00000522387 KRT86O43790 486 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 GLP2RO95838 553 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 MYL4P12829 197 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 HMGA1P17096 107 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 ACADSBP45954 432 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 ATXN1P54253 815 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 OGDHQ02218 1023 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 STXBP5Q5T5C0 1151 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 BSPRYQ5W0U4 402 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 PDE12Q6L8Q7 609 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 GRASPQ7Z6J2 395 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 C3orf20Q8ND61 904 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.345e-10■■□□□ 13.6
PABPC1-219ENST00000522387 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 CLDND1Q9NY35 253 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 STRIP2Q9ULQ0 834 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 PACSIN2Q9UNF0 486 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 A0A1W2PRU2 124 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 SCAMP3O14828 347 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 ATP1A1P05023 1023 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 PDGFRAP16234 1089 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 SP100P23497 879 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 GPS2Q13227 327 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 C10orf76Q5T2E6 689 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 BHLHA9Q7RTU4 235 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 DEFB106AQ8N104 65 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 RFFLQ8WZ73 363 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 MCRS1Q96EZ8 462 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 CYP2S1Q96SQ9 504 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 NAPGQ99747 312 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 CNGB3Q9NQW8 809 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 SFMBT1Q9UHJ3 866 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 USP3Q9Y6I4 520 aa12.95□□□□□ -0.34
PABPC1-219ENST00000522387 MTCL1Q9Y4B5 1905 aaKnown RBP12.95□□□□□ -0.34
PABPC1-219ENST00000522387 C2orf78A6NCI8 922 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CYP1A2P05177 515 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 FYNP06241 537 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 GABRR2P28476 465 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 GJC1P36383 396 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CCR2P41597 374 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 YWHAGP61981 247 aaKnown RBP eCLIP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CYP4F8P98187 520 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 NME3Q13232 169 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 ZNF268Q14587 947 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CBX2Q14781 532 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 PLEKHA7Q6IQ23 1121 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 SCD5Q86SK9 330 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 MIB1Q86YT6 1006 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 PPP2R3CQ969Q6 453 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 VCPIP1Q96JH7 1222 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CAPZA3Q96KX2 299 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 SPATA17Q96L03 361 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 GAS2L1Q99501 681 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 PNPLA8Q9NP80 782 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TCRBV5S1A1TA0A578 114 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 H3BQF6 201 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 MAP2K7O14733 419 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 BUB1BO60566 1050 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-219ENST00000522387 ZMYND10O75800 440 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 FTCDO95954 541 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 LTFP02788 710 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CSH1P0DML2 217 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 CSH2P0DML3 217 aa12.94□□□□□ -0.34
PABPC1-219ENST00000522387 TCF4P15884 667 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms