RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 BTBD8Q5XKL5 378 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 PRR23CQ6ZRP0 262 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 SCD5Q86SK9 330 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 TTC30AQ86WT1 665 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 ALLCQ8N6M5 410 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 TPSD1Q9BZJ3 242 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.81■■□□□ 1.08
SDCBP-209ENST00000522243 ARMCX3Q9UH62 379 aaPredicted RBP21.81■■□□□ 1.08
SDCBP-209ENST00000522243 NAGPAQ9UK23 515 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 MMP17Q9ULZ9 603 aa21.81■■□□□ 1.08
SDCBP-209ENST00000522243 SPAG17Q6Q759 2223 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.8■■□□□ 1.08
SDCBP-209ENST00000522243 GREM1O60565 184 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 KLF8O95600 359 aaPredicted RBP21.8■■□□□ 1.08
SDCBP-209ENST00000522243 GRIA2P42262 883 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 C10orf120Q5SQS8 335 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 ANO7Q6IWH7 933 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 KLHL10Q6JEL2 608 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 HTR3DQ70Z44 454 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 PHTF2Q8N3S3 785 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 TTC39CQ8N584 583 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 TXNDC5Q8NBS9 432 aaKnown RBP21.8■■□□□ 1.08
SDCBP-209ENST00000522243 SLC35C1Q96A29 364 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 FAXDC2Q96IV6 333 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 EBF1Q9UH73 591 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 COQ4Q9Y3A0 265 aa21.8■■□□□ 1.08
SDCBP-209ENST00000522243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.79■■□□□ 1.08
SDCBP-209ENST00000522243 PSMA7O14818 248 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 TRIM24O15164 1050 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 GADD45BO75293 160 aaPredicted RBP21.79■■□□□ 1.08
SDCBP-209ENST00000522243 TULP3O75386 442 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 HNRNPLP14866 589 aaKnown RBP eCLIP21.79■■□□□ 1.08
SDCBP-209ENST00000522243 STIM1Q13586 685 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 CUL2Q13617 745 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 CRY1Q16526 586 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 PLK5Q496M5 336 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 ARHGAP17Q68EM7 881 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 TMEM92Q6UXU6 159 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 TPGS1Q6ZTW0 290 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 CCDC186Q7Z3E2 898 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 PIGZQ86VD9 579 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 ETFBKMTQ8IXQ9 262 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 IL17RCQ8NAC3 791 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 DHTKD1Q96HY7 919 aaPredicted RBP21.79■■□□□ 1.08
SDCBP-209ENST00000522243 DNMT3LQ9UJW3 386 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 LSM7Q9UK45 103 aaKnown RBP21.79■■□□□ 1.08
SDCBP-209ENST00000522243 USP3Q9Y6I4 520 aa21.79■■□□□ 1.08
SDCBP-209ENST00000522243 A0A0A0MRY4 1105 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 DCDC2BA2VCK2 349 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 TBC1D3BA6NDS4 549 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 SGK1O00141 431 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 HOXC11O43248 304 aaPredicted RBP21.78■■□□□ 1.08
SDCBP-209ENST00000522243 GDF9O60383 454 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 EPN2O95208 641 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 CHRM1P11229 460 aaPredicted RBP21.78■■□□□ 1.08
SDCBP-209ENST00000522243 SDHBP21912 280 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 GOLGA8FQ08AF8 430 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 GOLGA8DPQ0D2H9 430 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 CCDC40Q4G0X9 1142 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 LOXL4Q96JB6 756 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 ZC3H10Q96K80 434 aaKnown RBP21.78■■□□□ 1.08
SDCBP-209ENST00000522243 DUSP9Q99956 384 aaKnown RBP21.78■■□□□ 1.08
SDCBP-209ENST00000522243 GTPBP4Q9BZE4 634 aaKnown RBP21.78■■□□□ 1.08
SDCBP-209ENST00000522243 DUSP15Q9H1R2 295 aaPredicted RBP21.78■■□□□ 1.08
SDCBP-209ENST00000522243 DEC1Q9P2X7 70 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 SDK1Q7Z5N4 2213 aa21.78■■□□□ 1.08
SDCBP-209ENST00000522243 NEDD8-MDP1E9PL57 170 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 BIN1O00499 593 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 RALAP11233 206 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 GBP1P32455 592 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 TNFRSF4P43489 277 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 KIR2DL1P43626 348 aaPredicted RBP21.77■■□□□ 1.08
SDCBP-209ENST00000522243 PLA2G4AP47712 749 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 PSEN1P49768 467 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 SF3A2Q15428 464 aaKnown RBP21.77■■□□□ 1.08
SDCBP-209ENST00000522243 GOLGA7BQ2TAP0 167 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 MIB1Q86YT6 1006 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 MDGA1Q8NFP4 955 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 BBS2Q9BXC9 721 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 SMOC1Q9H4F8 434 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 METTL14Q9HCE5 456 aaKnown RBP21.77■■□□□ 1.08
SDCBP-209ENST00000522243 RASAL2Q9UJF2 1139 aa21.77■■□□□ 1.08
SDCBP-209ENST00000522243 PPP1R3GB7ZBB8 358 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 TULP2O00295 520 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 HMBSP08397 361 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 CD19P15391 556 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 BMP6P22004 513 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 FMO5P49326 533 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 EFEMP1Q12805 493 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 C10orf76Q5T2E6 689 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 KLHDC10Q6PID8 442 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 RASSF3Q86WH2 238 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 ELOA2Q8IYF1 753 aaPredicted RBP21.76■■□□□ 1.07
SDCBP-209ENST00000522243 ANKRD52Q8NB46 1076 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 NETO1Q8TDF5 533 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 NELFBQ8WX92 580 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 NDRG1Q92597 394 aaKnown RBP21.76■■□□□ 1.07
SDCBP-209ENST00000522243 BHMTQ93088 406 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 CNOT6LQ96LI5 555 aaKnown RBP21.76■■□□□ 1.07
SDCBP-209ENST00000522243 RTKNQ9BST9 563 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms