RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 LIN28AQ9H9Z2 209 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-230ENST00000521724 PLGRKTQ9HBL7 147 aa9.97□□□□□ -0.81
CTNNA1-230ENST00000521724 PSMD13Q9UNM6 376 aa9.97□□□□□ -0.81
CTNNA1-230ENST00000521724 FOCADQ5VW36 1801 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 LOC100653049A0A140TA62 436 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 KANSL1LA0AUZ9 987 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 KRT34O76011 436 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 TCF4P15884 667 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 CIITAP33076 1130 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 CCR3P51677 355 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 YWHAGP61981 247 aaKnown RBP eCLIP9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 WASHC5Q12768 1159 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 APOFQ13790 326 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 TEX44Q53QW1 395 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 POTEHQ6S545 545 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 ZCCHC23Q6ZST2 131 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 MON1BQ7L1V2 547 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 AMIGO2Q86SJ2 522 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 FBXW8Q8N3Y1 598 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 NAT8LQ8N9F0 302 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 PPP1R14CQ8TAE6 165 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 NKD2Q969F2 451 aaPredicted RBP9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 C10orf88Q9H8K7 445 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 SIRPGQ9P1W8 387 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 XPO7Q9UIA9 1087 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 ITGB1BP2Q9UKP3 347 aa9.96□□□□□ -0.81
CTNNA1-230ENST00000521724 E7ESA3 106 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 ITM2AO43736 263 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 FAM155BO75949 473 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 KRT37O76014 449 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 ADRB2P07550 413 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 RBP3P10745 1247 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 ELK3P41970 407 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 GPC3P51654 580 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 GDF10P55107 478 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 BASP1P80723 227 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 STX3Q13277 289 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 CYTH1Q15438 398 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 PDCD4Q53EL6 469 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 TFDP3Q5H9I0 405 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 C6orf52Q5T4I8 152 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 TTC39BQ5VTQ0 682 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SLFN13Q68D06 897 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SPOCD1Q6ZMY3 1216 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SH3BP5LQ7L8J4 393 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 CBWD2Q8IUF1 395 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 DAW1Q8N136 415 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 ACSF2Q96CM8 615 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 VPS50Q96JG6 964 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SENP7Q9BQF6 1050 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SPATA7Q9P0W8 599 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SAE1Q9UBE0 346 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 SSUH2Q9Y2M2 353 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.82
CTNNA1-230ENST00000521724 TCRBV7S3A2A0A539 114 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SIN3BO75182 1162 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 TMEM63AO94886 807 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 PDGFRBP09619 1106 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 THRAP10827 490 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 ECE1P42892 770 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 ENTPD1P49961 510 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 DYNLT1P63172 113 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 PDAP1Q13442 181 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SNRNP35Q16560 246 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 CCDC80Q76M96 950 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SLC26A11Q86WA9 606 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SLC15A3Q8IY34 581 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 PPM1NQ8N819 430 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 RSAD2Q8WXG1 361 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 CMTM5Q96DZ9 223 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 CSRNP1Q96S65 589 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 CCT7Q99832 543 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 TRIM56Q9BRZ2 755 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 PI4K2AQ9BTU6 479 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 AMNQ9BXJ7 453 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 IFT122Q9HBG6 1241 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 TMEM8AQ9HCN3 771 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 XAB2Q9HCS7 855 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 THAP1Q9NVV9 213 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SCINQ9Y6U3 715 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 ZHX2Q9Y6X8 837 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 KBTBD13C9JR72 458 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 ADCY6O43306 1168 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 GAS7O60861 476 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SNNO75324 88 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 GDF11O95390 407 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SNRPAP09012 282 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 SSTR3P32745 418 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 DSG3P32926 999 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 HALP42357 657 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 CDK9P50750 372 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 CLCN2P51788 898 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 PSMC5P62195 406 aa9.95□□□□□ -0.82
CTNNA1-230ENST00000521724 MRPS5P82675 430 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms