RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SYNPO2LQ9H987 977 aa6.02□□□□□ -1.45
SKP1-208ENST00000521216 OBP2BQ9NPH6 170 aa6.02□□□□□ -1.45
SKP1-208ENST00000521216 NECTIN3Q9NQS3 549 aa6.02□□□□□ -1.45
SKP1-208ENST00000521216 SH3BP4Q9P0V3 963 aa6.02□□□□□ -1.45
SKP1-208ENST00000521216 IGSF9Q9P2J2 1179 aa6.02□□□□□ -1.45
SKP1-208ENST00000521216 POLR2AP24928 1970 aaKnown RBP6.01□□□□□ -1.45
SKP1-208ENST00000521216 SPRY2O43597 315 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 SKAP2O75563 359 aaPredicted RBP6.01□□□□□ -1.45
SKP1-208ENST00000521216 WDR47O94967 919 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 BMP5P22003 454 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 TRAPPC10P48553 1259 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 ICA1Q05084 483 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 FHL3Q13643 280 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 STRIP1Q5VSL9 837 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 ARL6IP4Q66PJ3 421 aaKnown RBP6.01□□□□□ -1.45
SKP1-208ENST00000521216 PTCHD4Q6ZW05 846 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 ATG16L2Q8NAA4 619 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 NGDNQ8NEJ9 315 aaKnown RBP6.01□□□□□ -1.45
SKP1-208ENST00000521216 SUN3Q8TAQ9 357 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 ZNF384Q8TF68 577 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 WDYHV1Q96HA8 205 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 UROC1Q96N76 676 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 PRPF18Q99633 342 aaKnown RBP6.01□□□□□ -1.45
SKP1-208ENST00000521216 MACROD1Q9BQ69 325 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 FSD1LQ9BXM9 530 aa6.01□□□□□ -1.45
SKP1-208ENST00000521216 GOLGA6L3A6NEY3 463 aa6□□□□□ -1.45
SKP1-208ENST00000521216 LGALS16A8MUM7 142 aa6□□□□□ -1.45
SKP1-208ENST00000521216 CA12O43570 354 aa6□□□□□ -1.45
SKP1-208ENST00000521216 FGAP02671 866 aa6□□□□□ -1.45
SKP1-208ENST00000521216 GPD1P21695 349 aa6□□□□□ -1.45
SKP1-208ENST00000521216 DRD1P21728 446 aa6□□□□□ -1.45
SKP1-208ENST00000521216 SLC5A2P31639 672 aa6□□□□□ -1.45
SKP1-208ENST00000521216 HTR7P34969 479 aa6□□□□□ -1.45
SKP1-208ENST00000521216 PBX1P40424 430 aa6□□□□□ -1.45
SKP1-208ENST00000521216 CYP4F2P78329 520 aa6□□□□□ -1.45
SKP1-208ENST00000521216 COL10A1Q03692 680 aa6□□□□□ -1.45
SKP1-208ENST00000521216 ATP1A4Q13733 1029 aa6□□□□□ -1.45
SKP1-208ENST00000521216 SPARCL1Q14515 664 aa6□□□□□ -1.45
SKP1-208ENST00000521216 ST3GAL2Q16842 350 aa6□□□□□ -1.45
SKP1-208ENST00000521216 PFKFB4Q16877 469 aa6□□□□□ -1.45
SKP1-208ENST00000521216 ZNF362Q5T0B9 420 aaPredicted RBP6□□□□□ -1.45
SKP1-208ENST00000521216 CCDC174Q6PII3 467 aa6□□□□□ -1.45
SKP1-208ENST00000521216 ZNF804AQ7Z570 1209 aa6□□□□□ -1.45
SKP1-208ENST00000521216 TTC30AQ86WT1 665 aa6□□□□□ -1.45
SKP1-208ENST00000521216 PSMD1Q99460 953 aa6□□□□□ -1.45
SKP1-208ENST00000521216 CIPCQ9C0C6 399 aa6□□□□□ -1.45
SKP1-208ENST00000521216 TRIM36Q9NQ86 728 aa6□□□□□ -1.45
SKP1-208ENST00000521216 SNX15Q9NRS6 342 aa6□□□□□ -1.45
SKP1-208ENST00000521216 TFCP2L1Q9NZI6 479 aa6□□□□□ -1.45
SKP1-208ENST00000521216 LRFN1Q9P244 771 aa6□□□□□ -1.45
SKP1-208ENST00000521216 ASAP1Q9ULH1 1129 aa6□□□□□ -1.45
SKP1-208ENST00000521216 COL15A1P39059 1388 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 PNMA6EA0A0J9YXQ4 647 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 J3KTA2 159 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 TMPRSS11DO60235 418 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 MYCLP12524 364 aaPredicted RBP5.99□□□□□ -1.45
SKP1-208ENST00000521216 CLK3P49761 638 aaKnown RBP5.99□□□□□ -1.45
SKP1-208ENST00000521216 COPB1P53618 953 aaKnown RBP5.99□□□□□ -1.45
SKP1-208ENST00000521216 PSG6Q00889 435 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 DEUP1Q05D60 604 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 BFSP2Q13515 415 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 CLCA4Q14CN2 919 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 CCDC38Q502W7 563 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 TMEM196Q5HYL7 178 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 DENND2CQ68D51 928 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 CEP85Q6P2H3 762 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 MTHFD1LQ6UB35 978 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 KIRREL2Q6UWL6 708 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 STYXQ8WUJ0 223 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 TBC1D5Q92609 795 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 CTHRC1Q96CG8 243 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 EIF3CQ99613 913 aaKnown RBP5.99□□□□□ -1.45
SKP1-208ENST00000521216 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 USP29Q9HBJ7 922 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 PTPRHQ9HD43 1115 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 ALG13Q9NP73 1137 aaKnown RBP5.99□□□□□ -1.45
SKP1-208ENST00000521216 ADAM21Q9UKJ8 722 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 WNT6Q9Y6F9 365 aa5.99□□□□□ -1.45
SKP1-208ENST00000521216 M0R3H8 397 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 ASNA1O43681 348 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 TJP3O95049 919 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 TNFRSF6BO95407 300 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 ZNF37AP17032 561 aaPredicted RBP5.98□□□□□ -1.45
SKP1-208ENST00000521216 ITPKBP27987 946 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 PDIA3P30101 505 aaKnown RBP5.98□□□□□ -1.45
SKP1-208ENST00000521216 MCM5P33992 734 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 GSTM5P46439 218 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 DIO1P49895 249 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 LMAN2Q12907 356 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 ACOX1Q15067 660 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 ZACNQ401N2 412 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 FAM83BQ5T0W9 1011 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 GRHL2Q6ISB3 625 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 GATAD2AQ86YP4 633 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 TERB1Q8NA31 727 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 DAZAP1Q96EP5 407 aaKnown RBP5.98□□□□□ -1.45
SKP1-208ENST00000521216 MMS19Q96T76 1030 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 TIMP4Q99727 224 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 HELLSQ9NRZ9 838 aa5.98□□□□□ -1.45
SKP1-208ENST00000521216 VPS4AQ9UN37 437 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms