RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SLITRK6Q9H5Y7 841 aa19.1■□□□□ 0.65
VEGFA-222ENST00000520948 CYTH4Q9UIA0 394 aa19.1■□□□□ 0.65
VEGFA-222ENST00000520948 NOCTQ9UK39 431 aaKnown RBP19.1■□□□□ 0.65
VEGFA-222ENST00000520948 CAPN11Q9UMQ6 739 aa19.1■□□□□ 0.65
VEGFA-222ENST00000520948 PIAS3Q9Y6X2 628 aa19.1■□□□□ 0.65
VEGFA-222ENST00000520948 CEP250Q9BV73 2442 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 SOBPA7XYQ1 873 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 M0QYV0 167 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 MAN2B1O00754 1011 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 ZDHHC11BP0C7U3 371 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 PPP3CCP48454 512 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 SLC8A3P57103 927 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 TAF10Q12962 218 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 SNX30Q5VWJ9 437 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 ZNF677Q86XU0 584 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 VSTM4Q8IW00 320 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 OVCA2Q8WZ82 227 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 FAM3CQ92520 227 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 CHRDQ9H2X0 955 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 ATXN3LQ9H3M9 355 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 FBXO44Q9H4M3 255 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 AIPL1Q9NZN9 384 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 SCML2Q9UQR0 700 aa19.09■□□□□ 0.65
VEGFA-222ENST00000520948 LRRC53A6NM62 1247 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 ZNF263O14978 683 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 CHRNB2P17787 502 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 CDH5P33151 784 aaPredicted RBP19.08■□□□□ 0.64
VEGFA-222ENST00000520948 LPAL2Q16609 132 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 PM20D1Q6GTS8 502 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 GPIHBP1Q8IV16 184 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 SCML4Q8N228 414 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 DEPDC1BQ8WUY9 529 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 RSPRY1Q96DX4 576 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 HSFY1Q96LI6 401 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 SLC4A5Q9BY07 1137 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 TRIM5Q9C035 493 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 LMAN1LQ9HAT1 526 aa19.08■□□□□ 0.64
VEGFA-222ENST00000520948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.646e-8■■□□□ 13
VEGFA-222ENST00000520948 ZNF840PA6NDX5 716 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 HEPACAM2A8MVW5 462 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 GYPCP04921 128 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 FERP16591 822 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 WEE1P30291 646 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 KRT9P35527 623 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 PGFP49763 221 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 PDE6CP51160 858 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 TKTL1P51854 596 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 CYP4F8P98187 520 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 STXBP5Q5T5C0 1151 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 SPECC1LQ69YQ0 1117 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 CCDC186Q7Z3E2 898 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 PDZD8Q8NEN9 1154 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 FBXO32Q969P5 355 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 SLITRK1Q96PX8 696 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 SYT11Q9BT88 431 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 SLC46A2Q9BY10 475 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 TASP1Q9H6P5 420 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 CYLDQ9NQC7 956 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 CHORDC1Q9UHD1 332 aaPredicted RBP19.07■□□□□ 0.64
VEGFA-222ENST00000520948 USP18Q9UMW8 372 aa19.07■□□□□ 0.64
VEGFA-222ENST00000520948 MMEP08473 750 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 TDGF1P13385 188 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 DDX6P26196 483 aaKnown RBP eCLIP19.06■□□□□ 0.648e-8■□□□□ 10.7
VEGFA-222ENST00000520948 ZBED6P86452 979 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 PLCB2Q00722 1185 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 FMO1Q01740 532 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 CDR2Q01850 454 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 IFRD2Q12894 506 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-222ENST00000520948 E4F1Q66K89 784 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-222ENST00000520948 TMEM110Q86TL2 294 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 MON1AQ86VX9 555 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 FMNL3Q8IVF7 1028 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 MFSD6LQ8IWD5 586 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 OLIG1Q8TAK6 271 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 SLC20A1Q8WUM9 679 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 SYN2Q92777 582 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-222ENST00000520948 TRPV4Q9HBA0 871 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 TRPV5Q9NQA5 729 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 TRPM5Q9NZQ8 1165 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 ZMYM5Q9UJ78 669 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 F5P12259 2224 aa19.06■□□□□ 0.64
VEGFA-222ENST00000520948 NUP210Q8TEM1 1887 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 ARNTLO00327 626 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 CYP1A1P04798 512 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 CCDC172P0C7W6 258 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 CASP14P31944 242 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 PRKCIP41743 596 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 SOX9P48436 509 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 RGS7P49802 495 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 ZNF75DP51815 510 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 SATB1Q01826 763 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 TBX2Q13207 712 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-222ENST00000520948 ARID5BQ14865 1188 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 ARHGAP15Q53QZ3 475 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 GPR158Q5T848 1215 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 SFMBT2Q5VUG0 894 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 TAF3Q5VWG9 929 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 TXNDC8Q6A555 127 aa19.05■□□□□ 0.64
VEGFA-222ENST00000520948 BHLHA9Q7RTU4 235 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms