RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 GRAP2O75791 330 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 SOAT2O75908 522 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 SEC24AO95486 1093 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 LTFP02788 710 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 FYNP06241 537 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 CNPP09543 421 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 USP17L7P0C7H9 530 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PDGFRAP16234 1089 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 ATF6P18850 670 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 GPD1P21695 349 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 DNAJB2P25686 324 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PSMA2P25787 234 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PCK1P35558 622 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 MATKP42679 507 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 MARCKSL1P49006 195 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 RNASE9P60153 205 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 ERVFC1P60507 584 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 ERVK-21P61565 698 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 YWHAZP63104 245 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 SLC25A11Q02978 314 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 CAMK1Q14012 370 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PPP2R5EQ16537 467 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 DDR2Q16832 855 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 CCDC14Q49A88 953 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 SEL1L2Q5TEA6 688 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 DCAF12L1Q5VU92 463 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 SDHAF4Q5VUM1 108 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 OTUD1Q5VV17 481 aaPredicted RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 DAB2IPQ5VWQ8 1189 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 HFE2Q6ZVN8 426 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 BEND5Q7L4P6 421 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 MTERF4Q7Z6M4 381 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 NUP93Q8N1F7 819 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 POF1BQ8WVV4 589 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 RXFP2Q8WXD0 754 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 CENPIQ92674 756 aaPredicted RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 KRT35Q92764 455 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 CAPZA3Q96KX2 299 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 CFAP57Q96MR6 1250 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 TGS1Q96RS0 853 aaKnown RBP8.92□□□□□ -0.98
VAPB-206ENST00000520497 TTLL2Q9BWV7 592 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PBX4Q9BYU1 374 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 ADAM33Q9BZ11 813 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 POPDC2Q9HBU9 364 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 TLR9Q9NR96 1032 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 COMMD8Q9NX08 183 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 SCML2Q9UQR0 700 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 SLC27A5Q9Y2P5 690 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PCDHA3Q9Y5H8 950 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 C2orf71A6NGG8 1288 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 PGRMC1O00264 195 aaKnown RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 SRGAP2O75044 1071 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 ERLIN1O75477 346 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 ENDOD1O94919 500 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 RTN3O95197 1032 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 FOSL2P15408 326 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 TCF4P15884 667 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 TFE3P19532 575 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 SDC4P31431 198 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 NOS2P35228 1153 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 TUFMP49411 452 aaKnown RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 DNA2P51530 1060 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 TAS2R40P59535 323 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 USP46P62068 366 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 RPL10AP62906 217 aaKnown RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 ADGRE1Q14246 886 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 C15orf59Q2T9L4 293 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 MGAT5BQ3V5L5 792 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 ODF2Q5BJF6 829 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 LRRC38Q5VT99 294 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 CC2D1AQ6P1N0 951 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 LILRA6Q6PI73 481 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 DENND5BQ6ZUT9 1274 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 CYP4V2Q6ZWL3 525 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 TMC7Q7Z402 723 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 POLNQ7Z5Q5 900 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 CREG2Q8IUH2 290 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 TCEAL8Q8IYN2 117 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 DEFB106AQ8N104 65 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 STKLD1Q8NE28 680 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 COG1Q8WTW3 980 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 MAIP1Q8WWC4 291 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 PPM1EQ8WY54 764 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 RUBCNQ92622 972 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 FAM149B1Q96BN6 582 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 KLHL5Q96PQ7 755 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 PSMB7Q99436 277 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 NPY6RQ99463 290 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 SEPT5Q99719 369 aaPredicted RBP8.91□□□□□ -0.98
VAPB-206ENST00000520497 NCAPGQ9BPX3 1015 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 TCF25Q9BQ70 676 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 CARD9Q9H257 536 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 NKX2-4Q9H2Z4 354 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 FBXO44Q9H4M3 255 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 PRDM12Q9H4Q4 367 aa8.91□□□□□ -0.98
VAPB-206ENST00000520497 ZNF576Q9H609 170 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms