RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 SNX21Q969T3 373 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 WBP2Q969T9 261 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SPHK2Q9NRA0 654 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CALCOCO1Q9P1Z2 691 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 DEC1Q9P2X7 70 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NXF1Q9UBU9 619 aaKnown RBP16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
CSGALNACT1-208ENST00000520003 LRRIQ3A6PVS8 624 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ARHGAP33O14559 1287 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 KLRC4O43908 158 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 OPHN1O60890 802 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 F13A1P00488 732 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZDHHC11BP0C7U3 371 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NTSR1P30989 418 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 AFMP43652 599 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ATXN3P54252 364 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CDH8P55286 799 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CLDN10P78369 228 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PREPLQ4J6C6 727 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 HECTD3Q5T447 861 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 TMEM25Q86YD3 366 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 MINDY1Q8N5J2 469 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NAT16Q8N8M0 369 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PARD3BQ8TEW8 1205 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 GTPBP2Q9BX10 602 aaKnown RBP16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SDCBP2Q9H190 292 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 LAMA5O15230 3695 aa16.62■□□□□ 0.25
CSGALNACT1-208ENST00000520003 MYO18AQ92614 2054 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 MYH10P35580 1976 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 A0A1W2PQD8 194 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 TRIM24O15164 1050 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 GREM1O60565 184 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 EXOC3O60645 756 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 VNN1O95497 513 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZSCAN22P10073 491 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 HOXB2P14652 356 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZNF423Q2M1K9 1284 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FOXD4L6Q3SYB3 417 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 C10orf76Q5T2E6 689 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 BTBD8Q5XKL5 378 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FOXD4L3Q6VB84 417 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FAM35AQ86V20 835 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PROSER1Q86XN7 944 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 GRAMD1CQ8IYS0 662 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CHCHD4Q8N4Q1 142 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 DEFB119Q8N690 84 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 KIAA0895Q8NCT3 520 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 OR2I1PQ8NGU4 316 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SCAMP5Q8TAC9 235 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 TMEM174Q8WUU8 243 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 KCNK16Q96T55 309 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CCSER2Q9H7U1 834 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 DMAC2Q9NW81 257 aa16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CHORDC1Q9UHD1 332 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZNF217O75362 1048 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NDUFV2P19404 249 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SLC5A3P53794 718 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 STK4Q13043 487 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SLC14A1Q13336 389 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZNF699Q32M78 642 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZNF667Q5HYK9 610 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 EGFLAMQ63HQ2 1017 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZNF419Q96HQ0 510 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ACOX2Q99424 681 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 GABRG3Q99928 467 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FAM13BQ9NYF5 915 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SERTAD1Q9UHV2 236 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SH3BP1Q9Y3L3 701 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NBEAQ8NFP9 2946 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ITPR1Q14643 2758 aa16.6■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ACTN4O43707 911 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 CACNG3O60359 315 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PHACTR2O75167 634 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 RDXP35241 583 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ME1P48163 572 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 PGFP49763 221 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 AP3M2P53677 418 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 BIRC3Q13489 604 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NCOA4Q13772 614 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 NUDT18Q6ZVK8 323 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 HTR3DQ70Z44 454 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 SLC9A9Q8IVB4 645 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 FUKQ8N0W3 1084 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 ZMIZ2Q8NF64 920 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 GOLGA5Q8TBA6 731 aa16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-208ENST00000520003 HSPA12BQ96MM6 686 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms