RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 PTPRJQ12913 1337 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ANKRD11Q6UB99 2663 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 SMIM28A0A1B0GU29 152 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 A0A1B0GVT2 93 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 SLC12A8A0AV02 714 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 LNP1A1A4G5 178 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 C9J4A7 227 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 THAP12O43422 761 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ATP9BO43861 1147 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 DPM1O60762 260 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ADH1BP00325 375 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 MT-ND3P03897 115 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 PRNPP04156 253 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 KLK3P07288 261 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 FAM200BP0CF97 657 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 SPINK2P20155 84 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 CA4P22748 312 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 KIF11P52732 1056 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 NNTQ13423 1086 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 RTN4RL1Q86UN2 441 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 MAP4K3Q8IVH8 894 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 SPNS2Q8IVW8 549 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 AHI1Q8N157 1196 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 OR2T34Q8NGX1 318 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 LNX1Q8TBB1 728 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 OVCA2Q8WZ82 227 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ERCC4Q92889 916 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 FAM149B1Q96BN6 582 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ELF4Q99607 663 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 NCAPGQ9BPX3 1015 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 CALN1Q9BXU9 219 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 SLC4A5Q9BY07 1137 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 COL20A1Q9P218 1284 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 AGO2Q9UKV8 859 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 WNT6Q9Y6F9 365 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 POLEQ07864 2286 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 KDM3BQ7LBC6 1761 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 CACNB4O00305 520 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 EXOC3O60645 756 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 LRRN2O75325 713 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 PPP1R37O75864 691 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 IL1BP01584 269 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 VCLP18206 1134 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 GNL1P36915 607 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 P2RY2P41231 377 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 LEPRP48357 1165 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 DNA2P51530 1060 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ILF3Q12906 894 aaKnown RBP eCLIP3□□□□□ -1.93
EFR3A-202ENST00000519656 SEMA3BQ13214 749 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ZNF177Q13360 481 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 KRT33BQ14525 404 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 POLD3Q15054 466 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 ELOCQ15369 112 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 SLC10A6Q3KNW5 377 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 PHF19Q5T6S3 580 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 FBXL19Q6PCT2 694 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 NUP93Q8N1F7 819 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ARL14EPQ8N8R7 260 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 APOBEC4Q8WW27 367 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 CPB2Q96IY4 423 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 EIF2AK1Q9BQI3 630 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 TARS2Q9BW92 718 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 EDEM3Q9BZQ6 932 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 ZMYND12Q9H0C1 365 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 TMX1Q9H3N1 280 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 FANCEQ9HB96 536 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 PARD6AQ9NPB6 346 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 FBXL12Q9NXK8 326 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 DDX43Q9NXZ2 648 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 MBD1Q9UIS9 605 aaPredicted RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 RASAL2Q9UJF2 1139 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 SLC27A5Q9Y2P5 690 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 C2CD2Q9Y426 696 aa3□□□□□ -1.93
EFR3A-202ENST00000519656 INTS1Q8N201 2190 aaKnown RBP3□□□□□ -1.93
EFR3A-202ENST00000519656 MYH2Q9UKX2 1941 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 FIGNL2A6NMB9 653 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 METTL12A8MUP2 240 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 KPNA3O00505 521 aaPredicted RBP2.99□□□□□ -1.93
EFR3A-202ENST00000519656 MTSS1O43312 755 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 STBD1O95210 358 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 LYPLA2O95372 231 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 IGHA2P01877 340 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 AFPP02771 609 aaKnown RBP2.99□□□□□ -1.93
EFR3A-202ENST00000519656 RPN1P04843 607 aaKnown RBP2.99□□□□□ -1.93
EFR3A-202ENST00000519656 FGRP09769 529 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 TKTP29401 623 aaKnown RBP2.99□□□□□ -1.93
EFR3A-202ENST00000519656 GCKP35557 465 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 MAPK10P53779 464 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 ADAM17P78536 824 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 SPAG1Q07617 926 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 DSC1Q08554 894 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 DHCR24Q15392 516 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 NR0B2Q15466 257 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 TMEM196Q5HYL7 178 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 HES3Q5TGS1 186 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 CENPPQ6IPU0 288 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 VITQ6UXI7 678 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 LRRC52Q8N7C0 313 aa2.99□□□□□ -1.93
EFR3A-202ENST00000519656 ATP6V0D2Q8N8Y2 350 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms