RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ISXQ2M1V0 245 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 APPL2Q8NEU8 664 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 INSM2Q96T92 566 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 TEKT3Q9BXF9 490 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 TMEM245Q9H330 911 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 DCTPP1Q9H773 170 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 PTPRHQ9HD43 1115 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 ZMYM5Q9UJ78 669 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 NUB1Q9Y5A7 615 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 NUMA1Q14980 2115 aa7.33□□□□□ -1.24
CTNNA1-216ENST00000519489 LY6G6EA0A0G2JKS1 128 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 OR6C75A6NL08 312 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 K7EM74 188 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 LEFTY2O00292 366 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 LAD1O00515 517 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 SIGLEC6O43699 453 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TULP3O75386 442 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 CENPBP07199 599 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 USP17L7P0C7H9 530 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 HAPLN1P10915 354 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 RBMS1P29558 406 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 MCM4P33991 863 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 POLE2P56282 527 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 ASIC1P78348 528 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 MGAT5BQ3V5L5 792 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 LY6G5CQ5SRR4 150 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 ATF7IP2Q5U623 682 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TMTC3Q6ZXV5 915 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 FAM124AQ86V42 546 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 CACUL1Q86Y37 369 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 CHPFQ8IZ52 775 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TERB1Q8NA31 727 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 RDM1Q8NG50 284 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 CTCFLQ8NI51 663 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 EXOC6Q8TAG9 804 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TCP11Q8WWU5 503 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 MRPS31Q92665 395 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 BIRC7Q96CA5 298 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 LZTS2Q9BRK4 669 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 OSBPL2Q9H1P3 480 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 ADNPQ9H2P0 1102 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TMEM206Q9H813 350 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 CUEDC1Q9NWM3 386 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 TUBGCP4Q9UGJ1 667 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 ARHGAP26Q9UNA1 814 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 MAGED2Q9UNF1 606 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 U3KQA8 63 aa7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 COL27A1Q8IZC6 1860 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-216ENST00000519489 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 DCHS2Q6V1P9 2916 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 CNTNAP5Q8WYK1 1306 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 A0A1B0GVM2 712 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 ARHGAP10A1A4S6 786 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 PPEF2O14830 753 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 VILLO15195 856 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 TSPAN3O60637 253 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 DDAH1O94760 285 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 LDLRP01130 860 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 CKMP06732 381 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 C8BP07358 591 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 ADH5P11766 374 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 MX1P20591 662 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 ABCB4P21439 1286 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 PTGIRP43119 386 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 QARSP47897 775 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 AARSP49588 968 aaKnown RBP eCLIP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 COPAP53621 1224 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 E2F1Q01094 437 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 MYBPC2Q14324 1141 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 MXD4Q14582 209 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 TEAD4Q15561 434 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 IMMTQ16891 758 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 FAM187BQ17R55 369 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 SLC39A12Q504Y0 691 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 NT5DC1Q5TFE4 455 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 SPNS3Q6ZMD2 512 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 XYLT1Q86Y38 959 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 BSNDQ8WZ55 320 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 WBP2Q969T9 261 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 CCDC97Q96F63 343 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 SLC6A18Q96N87 628 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 DEPDC7Q96QD5 511 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 CCDC113Q9H0I3 377 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 TMLHEQ9NVH6 421 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 RGL1Q9NZL6 768 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 HSFX1Q9UBD0 423 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 SEL1LQ9UBV2 794 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 ERRFI1Q9UJM3 462 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 PCDHGA8Q9Y5G5 932 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 ENTPD2Q9Y5L3 495 aa7.31□□□□□ -1.24
CTNNA1-216ENST00000519489 A0A087WWV3 80 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 TRAV19A0A0A6YYK7 116 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 A0A1W2PR77 199 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 CYP26A1O43174 497 aa7.3□□□□□ -1.24
CTNNA1-216ENST00000519489 TNFSF15O95150 251 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms