RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 B3GNT3Q9Y2A9 372 aa14.04□□□□□ -0.16
PABPC1-208ENST00000519004 MEIS1O00470 390 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 COPEO14579 308 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 SLC26A4O43511 780 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 RSL1D1O76021 490 aaKnown RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 ZNF26P17031 533 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 JAK1P23458 1154 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 EPHA3P29320 983 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 GYG1P46976 350 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 BNIP3Q12983 259 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 PPP2R2DQ66LE6 453 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 MCF2L2Q86YR7 1114 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 CADM3Q8N126 398 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 FBXO36Q8NEA4 188 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 HM13Q8TCT9 377 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 TRUB1Q8WWH5 349 aaKnown RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 DOK1Q99704 481 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 MCM9Q9NXL9 1143 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 N6AMT1Q9Y5N5 214 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 TOGARAM1Q9Y4F4 1720 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 PRSS51A0A1B0GVH4 220 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 DYTNA2CJ06 578 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 TRIM64CA6NLI5 447 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 CFAP99D6REC4 459 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 CYB561D2O14569 222 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 ZMPSTE24O75844 475 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 TSPY3P0CV98 308 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 TSPY8P0CW00 308 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 BTDP43251 543 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 CYP2J2P51589 502 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 STX3Q13277 289 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 FGD3Q5JSP0 725 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 ANKRD26P1Q6NSI1 321 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 CATSPER3Q86XQ3 398 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 FAM71AQ8IYT1 594 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 FIBCD1Q8N539 461 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 HPS1Q92902 700 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 VTI1AQ96AJ9 217 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 NACC2Q96BF6 587 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 NSUN4Q96CB9 384 aaKnown RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 ZNF778Q96MU6 729 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 DMAC2Q9NW81 257 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 STK39Q9UEW8 545 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 CNOT11Q9UKZ1 510 aaKnown RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 PLLPQ9Y342 182 aa14.03□□□□□ -0.16
PABPC1-208ENST00000519004 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
PABPC1-208ENST00000519004 ARFGEF1Q9Y6D6 1849 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 ZNFX1Q9P2E3 1918 aaKnown RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 TNS2Q63HR2 1409 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 IREB2P48200 963 aaKnown RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 TAS2R40P59535 323 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 MRPS5P82675 430 aaKnown RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 GALNT2Q10471 571 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 OXA1LQ15070 435 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 TRIM16LQ309B1 348 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 ANKRD22Q5VYY1 191 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 LMBRD2Q68DH5 695 aaPredicted RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 ZFP1Q6P2D0 407 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 CPSF7Q8N684 471 aaKnown RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 TMEM102Q8N9M5 508 aaPredicted RBP14.02□□□□□ -0.16
PABPC1-208ENST00000519004 PNPLA3Q9NST1 481 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 GINM1Q9NU53 330 aa14.02□□□□□ -0.16
PABPC1-208ENST00000519004 ARHGEF37A1IGU5 675 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 TRIM64BA6NI03 449 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 NOTOA8MTQ0 251 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 PTPN1P18031 435 aaKnown RBP14.02□□□□□ -0.17
PABPC1-208ENST00000519004 NMT1P30419 496 aaKnown RBP14.02□□□□□ -0.17
PABPC1-208ENST00000519004 HNRNPFP52597 415 aaKnown RBP14.02□□□□□ -0.17
PABPC1-208ENST00000519004 ESRRGP62508 458 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 BFSP1Q12934 665 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 ITGADQ13349 1161 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.17
PABPC1-208ENST00000519004 TIGD2Q4W5G0 525 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 C12orf60Q5U649 245 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 ACAD10Q6JQN1 1059 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 BPHLQ86WA6 291 aaPredicted RBP14.02□□□□□ -0.17
PABPC1-208ENST00000519004 RHPN2Q8IUC4 686 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 NUDCD3Q8IVD9 361 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 SLC44A1Q8WWI5 657 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 ZNF641Q96N77 438 aaPredicted RBP14.02□□□□□ -0.17
PABPC1-208ENST00000519004 FERMT1Q9BQL6 677 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 APOL6Q9BWW8 343 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 PCDHB2Q9Y5E7 798 aa14.02□□□□□ -0.17
PABPC1-208ENST00000519004 LOC100653049A0A140TA62 436 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 EIF3DO15371 548 aaKnown RBP eCLIP14.01□□□□□ -0.17
PABPC1-208ENST00000519004 KRT34O76011 436 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 CD58P19256 250 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 SCNN1DP51172 638 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 DRICH1Q6PGQ1 229 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-208ENST00000519004 TRIM72Q6ZMU5 477 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 ITIH5Q86UX2 942 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 C11orf74Q86VG3 221 aa14.01□□□□□ -0.17
PABPC1-208ENST00000519004 CMTM5Q96DZ9 223 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms