RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 F5H423 210 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 SPRY2O43597 315 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 TMPRSS11DO60235 418 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 PROP1O75360 226 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 SKAP2O75563 359 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 WDR47O94967 919 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 NTSR2O95665 410 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 VIPP01282 170 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 PECAM1P16284 738 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 ENGP17813 658 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 DGKQP52824 942 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 EIF4A1P60842 406 aaKnown RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 E2F1Q01094 437 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 ICA1Q05084 483 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 PTK2BQ14289 1009 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 PCID2Q5JVF3 399 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 ZNF362Q5T0B9 420 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 PTCHD4Q6ZW05 846 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 FSTL5Q8N475 847 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 METTL25Q8N6Q8 603 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 C18orf8Q96DM3 657 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 VPS50Q96JG6 964 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 LENG8Q96PV6 779 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-207ENST00000518569 CRB3Q9BUF7 120 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 SEMA4GQ9NTN9 838 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 C11orf21Q9P2W6 132 aa4.33□□□□□ -1.72
VPS13B-207ENST00000518569 AP4M1O00189 453 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 CES2O00748 559 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 ZNF213O14771 459 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 CBFA2T3O75081 653 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 JTBO76095 146 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 FGAP02671 866 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 TMEM225BP0DP42 221 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 CREB1P16220 341 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 ADRA1DP25100 572 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 CLK3P49761 638 aaKnown RBP4.32□□□□□ -1.72
VPS13B-207ENST00000518569 MTAPQ13126 283 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 SPARCL1Q14515 664 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 PUM3Q15397 648 aaKnown RBP4.32□□□□□ -1.72
VPS13B-207ENST00000518569 ZACNQ401N2 412 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 C10orf62Q5T681 223 aaPredicted RBP4.32□□□□□ -1.72
VPS13B-207ENST00000518569 TSTD2Q5T7W7 516 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 STRIP1Q5VSL9 837 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 SLC29A4Q7RTT9 530 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 RASAL3Q86YV0 1011 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 RASGRP3Q8IV61 690 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 C11orf44Q8N8P7 122 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 FAM71BQ8TC56 605 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 POF1BQ8WVV4 589 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 OVCA2Q8WZ82 227 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 SARAFQ96BY9 339 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 GRAMD1AQ96CP6 724 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 EID2BQ96D98 161 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 WDYHV1Q96HA8 205 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 SNX15Q9NRS6 342 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 GAR1Q9NY12 217 aaKnown RBP4.32□□□□□ -1.72
VPS13B-207ENST00000518569 IGSF9Q9P2J2 1179 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 MGAT4CQ9UBM8 478 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 ZNHIT2Q9UHR6 403 aa4.32□□□□□ -1.72
VPS13B-207ENST00000518569 H7C1Q1 480 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 NPC1O15118 1278 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ZSCAN9O15535 394 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 DHHO43323 396 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ITGA5P08648 1049 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 NPPBP16860 134 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 GPD1P21695 349 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ELLP55199 621 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 HOXA4Q00056 320 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 KCNJ12Q14500 433 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ARHGAP15Q53QZ3 475 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 AKNAD1Q5T1N1 836 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 L1TD1Q5T7N2 865 aaKnown RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 DPY19L3Q6ZPD9 716 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 CLASRPQ8N2M8 674 aaKnown RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 PNPLA1Q8N8W4 532 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 FAM98AQ8NCA5 519 aaKnown RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 VPS37AQ8NEZ2 397 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 RSC1A1Q92681 617 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ARPC5LQ9BPX5 153 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 CPNE5Q9HCH3 593 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ARPP21Q9UBL0 812 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-207ENST00000518569 ADAM21Q9UKJ8 722 aa4.31□□□□□ -1.72
VPS13B-207ENST00000518569 SYT5O00445 386 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 PIP5K1BO14986 540 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 HNRNPCP07910 306 aaKnown RBP eCLIP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 SRGAP2BP0DMP2 458 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 PDIA3P30101 505 aaKnown RBP4.3□□□□□ -1.72
VPS13B-207ENST00000518569 MCM5P33992 734 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 DIO1P49895 249 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 POLE2P56282 527 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 INHBEP58166 350 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 PSG6Q00889 435 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 FOXO1Q12778 655 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 LMAN2Q12907 356 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 DNASE1L3Q13609 305 aa4.3□□□□□ -1.72
VPS13B-207ENST00000518569 BLMHQ13867 455 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms