RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NR1I3Q14994 352 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 CWF19L1Q69YN2 538 aaKnown RBP23.07■■□□□ 1.28
VEGFA-217ENST00000518538 TRIM68Q6AZZ1 485 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 PASD1Q8IV76 773 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 FLCNQ8NFG4 579 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 MSANTD3Q96H12 275 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 KLF16Q9BXK1 252 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-217ENST00000518538 HPS4Q9NQG7 708 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 GTSE1Q9NYZ3 720 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 CYTH4Q9UIA0 394 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 NUDT5Q9UKK9 219 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 CEP83Q9Y592 693 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 WNT6Q9Y6F9 365 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 PIAS3Q9Y6X2 628 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 TICRRQ7Z2Z1 1910 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 YJEFN3A6XGL0 299 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 E7ENQ6 273 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 GFPT2O94808 682 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 IFNAR2P48551 515 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 KPNA1P52294 538 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-217ENST00000518538 RUNX3Q13761 415 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 ITPRIPL2Q3MIP1 535 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 BTBD8Q5XKL5 378 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 TMEM110Q86TL2 294 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 WDTC1Q8N5D0 677 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 EPS8L1Q8TE68 723 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 DDX1Q92499 740 aaKnown RBP23.06■■□□□ 1.28
VEGFA-217ENST00000518538 EBF3Q9H4W6 596 aa23.06■■□□□ 1.28
VEGFA-217ENST00000518538 C8orf33Q9H7E9 229 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-217ENST00000518538 E2F8A0AVK6 867 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 E5RJQ4 531 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 STK25O00506 426 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 SLC9A3R1O14745 358 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 MDM4O15151 490 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 SART1O43290 800 aaKnown RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 ARSAP15289 507 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 CLCN5P51795 746 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 ZNF445P59923 1031 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 GOLGA8FQ08AF8 430 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 GOLGA8DPQ0D2H9 430 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 EML3Q32P44 896 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 BSPRYQ5W0U4 402 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 ASTLQ6HA08 431 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 RSRC2Q7L4I2 434 aaKnown RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 CACNA2D4Q7Z3S7 1137 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 NOP9Q86U38 636 aaKnown RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 C1orf131Q8NDD1 294 aaKnown RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 CLEC4CQ8WTT0 213 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 ATP2A3Q93084 1043 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 NOX5Q96PH1 765 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 MIS12Q9H081 205 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 ABCC13Q9NSE7 274 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 OLA1Q9NTK5 396 aaKnown RBP23.05■■□□□ 1.28
VEGFA-217ENST00000518538 SH3BP1Q9Y3L3 701 aa23.05■■□□□ 1.28
VEGFA-217ENST00000518538 COL4A3Q01955 1670 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 KANSL1LA0AUZ9 987 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 SHISA7A6NL88 538 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 MAN2B1O00754 1011 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 CDH5P33151 784 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-217ENST00000518538 UBASH3AP57075 661 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 TAF3Q5VWG9 929 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 C1orf228Q6PIY5 440 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 ZNF852Q6ZMS4 543 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 ZNF677Q86XU0 584 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 SCUBE3Q8IX30 993 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 CPA6Q8N4T0 437 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 GOLGA1Q92805 767 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 PDCL3Q9H2J4 239 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 TBC1D14Q9P2M4 693 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 RASAL2Q9UJF2 1139 aa23.04■■□□□ 1.28
VEGFA-217ENST00000518538 NOCTQ9UK39 431 aaKnown RBP23.04■■□□□ 1.28
VEGFA-217ENST00000518538 PAPSS1O43252 624 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-217ENST00000518538 LTFP02788 710 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 IRF1P10914 325 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 AOC1P19801 751 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 CTHP32929 405 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 EFEMP1Q12805 493 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 RALGPS2Q86X27 583 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-217ENST00000518538 MIB1Q86YT6 1006 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 TMEM35BQ8NCS4 154 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 TTC8Q8TAM2 541 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 RNF139Q8WU17 664 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 PPP1R13BQ96KQ4 1090 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 CPXM1Q96SM3 734 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 FOXQ1Q9C009 403 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 LINC00597Q9H2U6 94 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 ECT2Q9H8V3 914 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 LTB4R2Q9NPC1 389 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 MARCH2Q9P0N8 246 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 STRIP2Q9ULQ0 834 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 MYO6Q9UM54 1294 aa23.03■■□□□ 1.28
VEGFA-217ENST00000518538 MRPS17Q9Y2R5 130 aaKnown RBP23.03■■□□□ 1.28
VEGFA-217ENST00000518538 OTOL1A6NHN0 477 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-217ENST00000518538 SPECC1L-ADORA2AF8WAN1 911 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 NFATC1O95644 943 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 LSM8O95777 96 aaKnown RBP23.02■■□□□ 1.28
VEGFA-217ENST00000518538 MMEP08473 750 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 CD72P21854 359 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 SOX9P48436 509 aa23.02■■□□□ 1.28
VEGFA-217ENST00000518538 VCPP55072 806 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms