RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 VPS45Q9NRW7 570 aa18.28■□□□□ 0.52
CTNNA1-206ENST00000517980 CEP192Q8TEP8 1941 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 BCLAF3A2AJT9 711 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 MAPK13O15264 365 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 CYP26A1O43174 497 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 TULP3O75386 442 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 PSMC2P35998 433 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 EIF2DP41214 584 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 WASP42768 502 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 TPGS1Q6ZTW0 290 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 INTS8Q75QN2 995 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 PGBD3Q8N328 593 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 PHTF2Q8N3S3 785 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 SEMA4DQ92854 862 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 OTUB2Q96DC9 234 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 CNOT6LQ96LI5 555 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 NT5C1AQ9BXI3 368 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 DEC1Q9P2X7 70 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 SCML2Q9UQR0 700 aa18.27■□□□□ 0.52
CTNNA1-206ENST00000517980 A0A1W2PQH9 124 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 PATE3B3GLJ2 98 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 ALDH1A2O94788 518 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 ATP5C1P36542 298 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 DHPSP49366 369 aaPredicted RBP18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 TUBP50607 506 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 LIMK1P53667 647 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 INCA1Q0VD86 236 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 NFIL3Q16649 462 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 PPP1R26Q5T8A7 1209 aaPredicted RBP18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 RNF43Q68DV7 783 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 HTR3DQ70Z44 454 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 ETFBKMTQ8IXQ9 262 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 GUF1Q8N442 669 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 HMGB4Q8WW32 186 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 HEXIM2Q96MH2 286 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 IMPG2Q9BZV3 1241 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 CYP3A43Q9HB55 503 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 HCN2Q9UL51 889 aa18.26■□□□□ 0.51
CTNNA1-206ENST00000517980 A0A1W2PQ27 194 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 A0A1W2PQ64 194 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 A0A1W2PQD8 194 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 HOXC11O43248 304 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 GREM1O60565 184 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 CILPO75339 1184 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 RARGP13631 454 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 RPL13P26373 211 aaKnown RBP18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 EOGTQ5NDL2 527 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 N4BP2L1Q5TBK1 243 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 PMS2CLQ68D20 193 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 TATDN2Q93075 761 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 BHMTQ93088 406 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 SCAND2PQ9GZW5 306 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 POLMQ9NP87 494 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-206ENST00000517980 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 C4orf47A7E2U8 309 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 NEDD8-MDP1E9PL57 170 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 MAP3K13O43283 966 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 PNOCQ13519 176 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 C10orf120Q5SQS8 335 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 C10orf76Q5T2E6 689 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 ARMCX6Q7L4S7 300 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 SCD5Q86SK9 330 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 MIB1Q86YT6 1006 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 TMEFF1Q8IYR6 380 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 DEFB119Q8N690 84 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 ZNF513Q8N8E2 541 aaPredicted RBP18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 OLIG1Q8TAK6 271 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 PIGKQ92643 395 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 DUSP16Q9BY84 665 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 TMEM8AQ9HCN3 771 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 DNAJC17Q9NVM6 304 aaKnown RBP18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 MBD1Q9UIS9 605 aaPredicted RBP18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 CHD8Q9HCK8 2581 aa18.24■□□□□ 0.51
CTNNA1-206ENST00000517980 TCRBV21S2A2A0A5A6 115 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 TRIM21P19474 475 aaKnown RBP18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 P2RY2P41231 377 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 KIF11P52732 1056 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 IRX4P78413 519 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 ZCWPW2Q504Y3 356 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 KRT39Q6A163 491 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 TOGARAM2Q6ZUX3 1019 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 CCDC150Q8NCX0 1101 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 DDX1Q92499 740 aaKnown RBP18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 ACOX2Q99424 681 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 EDEM2Q9BV94 578 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 LSM14BQ9BX40 385 aaKnown RBP18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 CYLDQ9NQC7 956 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 PLK2Q9NYY3 685 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 NAGPAQ9UK23 515 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 ADAMTS9Q9P2N4 1935 aa18.23■□□□□ 0.51
CTNNA1-206ENST00000517980 KHNYNO15037 678 aaKnown RBP18.22■□□□□ 0.51
CTNNA1-206ENST00000517980 HMBSP08397 361 aa18.22■□□□□ 0.51
CTNNA1-206ENST00000517980 TYRP14679 529 aa18.22■□□□□ 0.51
CTNNA1-206ENST00000517980 PRCPP42785 496 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms