RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 IL21RQ9HBE5 538 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 DNAJC17Q9NVM6 304 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 CACNA2D2Q9NY47 1150 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 GMIPQ9P107 970 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 SUSD2Q9UGT4 822 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 GOLGA4Q13439 2230 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 TENM4Q6N022 2769 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 FAM92AA1XBS5 289 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 ZNF233A6NK53 670 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 NEDD8-MDP1E9PL57 170 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 CACNG3O60359 315 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 NDUFS2O75306 463 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 ZDHHC11BP0C7U3 371 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 TYRP14679 529 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 GNSP15586 552 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 HOXD13P35453 343 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 TUBP50607 506 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 SLC5A3P53794 718 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 SURF1Q15526 300 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 WDR72Q3MJ13 1102 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 SYCP2LQ5T4T6 812 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 RRAGBQ5VZM2 374 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 PAQR9Q6ZVX9 377 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 MARCH9Q86YJ5 346 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 B3GALNT2Q8NCR0 500 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 BAHD1Q8TBE0 780 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 FOXJ1Q92949 421 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 HPS3Q969F9 1004 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 P2RY11Q96G91 374 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 PANK4Q9NVE7 773 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 TOR4AQ9NXH8 423 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 IL37Q9NZH6 218 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 HSPBP1Q9NZL4 362 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 CCDC39Q9UFE4 941 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 FBXO2Q9UK22 296 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 APOBEC2Q9Y235 224 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
CTNNA1-205ENST00000517904 CABIN1Q9Y6J0 2220 aa12.02□□□□□ -0.48
CTNNA1-205ENST00000517904 ATMQ13315 3056 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 A0A087X0B3 334 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 A8MXQ7 604 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 KIAA0391O15091 583 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 ZBTB24O43167 697 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 TBX18O95935 607 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 FAM163BP0C2L3 166 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 DLATP10515 647 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 CD6P30203 668 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 BNC1Q01954 994 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 WDR45BQ5MNZ6 344 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 SDE2Q6IQ49 451 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 KIAA1324Q6UXG2 1013 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 HTR3DQ70Z44 454 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 TMPRSS7Q7RTY8 843 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 BRAPQ7Z569 592 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 ZCCHC9Q8N567 271 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 DNASE2BQ8WZ79 361 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 TOE1Q96GM8 510 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 CRELD1Q96HD1 420 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 CLIC6Q96NY7 704 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 BBS2Q9BXC9 721 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 ZDHHC5Q9C0B5 715 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 GZF1Q9H116 711 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 WSB2Q9NYS7 404 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 MARK1Q9P0L2 795 aa12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 KIAA1522Q9P206 1035 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 FNDC3AQ9Y2H6 1198 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-205ENST00000517904 A0A1B0GTW7 788 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 MEI4A8MW99 385 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 TLR5O60602 858 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 DKK1O94907 266 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 CISD3P0C7P0 127 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 ATXN1LP0C7T5 689 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 NCAM1P13591 858 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 TNNC1P63316 161 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 SNRNP35Q16560 246 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 FUT11Q495W5 492 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 RDH13Q8NBN7 331 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 SETD7Q8WTS6 366 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 SCFD1Q8WVM8 642 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 GPR174Q9BXC1 333 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 MKRN2Q9H000 416 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 NACA2Q9H009 215 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 XYLT2Q9H1B5 865 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 GAREM1Q9H706 876 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 SMYD3Q9H7B4 428 aa12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 DMAP1Q9NPF5 467 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-205ENST00000517904 USP36Q9P275 1121 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms