RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FGFR2P21802 821 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 RBL1P28749 1068 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 MTAPQ13126 283 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 ETFDHQ16134 617 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 SDR16C5Q8N3Y7 309 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 GALNT16Q8N428 558 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 IPCEF1Q8WWN9 437 aaPredicted RBP6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 EDC3Q96F86 508 aaKnown RBP6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 ZC3H10Q96K80 434 aaKnown RBP6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 CCDC17Q96LX7 622 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 FAM227BQ96M60 508 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 SEMA4CQ9C0C4 833 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 SLC25A32Q9H2D1 315 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 TRIM36Q9NQ86 728 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 HEYLQ9NQ87 328 aaPredicted RBP6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 BTBD3Q9Y2F9 522 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 WDR17Q8IZU2 1322 aa6.19□□□□□ -1.42
SCARNA1-201ENST00000517138 UBE2Q2LH0YL09 131 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 NCK2O43639 380 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 TMPRSS11DO60235 418 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 CHRM5P08912 532 aaPredicted RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 TRIM27P14373 513 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 STT3AP46977 705 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 EIF4A1P60842 406 aaKnown RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 DAZAP2Q15038 168 aaPredicted RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 SAFBQ15424 915 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 CERKLQ49MI3 558 aaPredicted RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 PAPD7Q5XG87 772 aaKnown RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 ZNF425Q6IV72 752 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 DCDC5Q6ZRR9 648 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 ZDHHC12Q96GR4 267 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 ZNF668Q96K58 619 aaPredicted RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 SNX15Q9NRS6 342 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 STEAP1Q9UHE8 339 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 SCAF8Q9UPN6 1271 aaKnown RBP6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 COL15A1P39059 1388 aa6.18□□□□□ -1.42
SCARNA1-201ENST00000517138 A0A1W2PPC4 97 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 A8MVJ9 347 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 FCHO1O14526 889 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 THAP12O43422 761 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 SNX2O60749 519 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 USP1O94782 785 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 MBPP02686 304 aaPredicted RBP6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 GNALP38405 381 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 GPC5P78333 572 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 LARS2Q15031 903 aaKnown RBP6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 MIS18BP1Q6P0N0 1132 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 TMEM65Q6PI78 240 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 KRT28Q7Z3Y7 464 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 FSTL5Q8N475 847 aaPredicted RBP6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 SUN3Q8TAQ9 357 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 FYTTD1Q96QD9 318 aaKnown RBP6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 PRSS22Q9GZN4 317 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 SPRTNQ9H040 489 aaPredicted RBP6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 SAP30LQ9HAJ7 183 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 USP29Q9HBJ7 922 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 VPS45Q9NRW7 570 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 MYO1AQ9UBC5 1043 aa6.17□□□□□ -1.42
SCARNA1-201ENST00000517138 H3BNC9 293 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 CLIC1O00299 241 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 FYB1O15117 783 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 BCAR3O75815 825 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 NDST3O95803 873 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 ADRA1DP25100 572 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 PBX1P40424 430 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 CFHR3Q02985 330 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 SLC14A1Q13336 389 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 MFSD13AQ14CX5 517 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 RAP1GAP2Q684P5 730 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 ABLIM2Q6H8Q1 611 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 KSR2Q6VAB6 950 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 KIAA0408Q6ZU52 694 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 CCAR1Q8IX12 1150 aaKnown RBP6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 C12orf76Q8N812 135 aaPredicted RBP6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 PJA1Q8NG27 643 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 MBD3L2Q8NHZ7 208 aaPredicted RBP6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 ZNF398Q8TD17 642 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 NRIP3Q9NQ35 241 aa6.16□□□□□ -1.42
SCARNA1-201ENST00000517138 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 CLCA1A8K7I4 914 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 TMEM232C9JQI7 657 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 FOXN3O00409 490 aaPredicted RBP6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 APOL1O14791 398 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 AREL1O15033 823 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 CBFA2T3O75081 653 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 WDR47O94967 919 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 TMEM225BP0DP42 221 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 CD19P15391 556 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 ATP5F1P24539 256 aaPredicted RBP6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 PMS2P11Q13670 270 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 Q4G0T1 1027 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 MORN5Q5VZ52 161 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 C11orf87Q6NUJ2 197 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 HIBCHQ6NVY1 386 aaPredicted RBP6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 MZT2AQ6P582 158 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 ZNF813Q6ZN06 617 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms